Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2290 ATGGTTCCAAAGTACATCTTAGGTTATGCTGTGGTTATTGCTTTTACTGTCTTGTTCTTCTTGATCTGTGGATACTTCTTGAGCAGTCATGACAAACCCAAATATTGGCATTGGATGAACAAAATTTCAACCACGACATACCTTTATGAAGGGCTCTTGATGAACCAGTACCAGATAAATGATACCTCTGGGAAAGTTGGTGGTATACCCATTGCCGATTTTGATATCTTGAAACGTTTTCACATTGGAGTTGATGAATATAAGATGACAAATGTGCTTATAATGTTTGGTTGGGCAGTATCCGAGAGCTCCTTCAAGGAAGAAAACTACACCATTTGCAGCACAACAAATGCAAAAGGATCCTCCTCCCAAGCCATATCATCATACTCCAGAAACTCGAACGCACCTAATGCTGCTACTCTTGTGTCTCTTTTTCCATTTTCTTTGAGTTATTGGTTGGCTCATCGCCCTGTTAGTTTCTCTAACTCCCATGTGGTTCCCAAAAAAGCTCATAGCAAAGGCACATTTTCTTCAGTTACTGCTGCAAAAAGAACTCACGACAATTCAACGTACAAAGATTCACAAGTGATCAAGGACCTCACTTCCTGTGATATCTTTGATGGCACTTGGGTACATGATGATGCTGAACCCCTTTATCAACATGGGTCATGTCCATTTCTTGATGACACCTTTAACTGCTTCAAGAATGGACGTTCAGATTTGGATTATGTTAAATATCGATGGAAGCCACGTGGATGTCACATTCCAAGGTTTGATGGGTTGCAAATGTTGGCCATGCTAAGAGGTAAAAGGGTGGTGTTTGTAGGAGACTCCTTGAACAGGAACATGTGGCAGTCTTTGGTGTGTGCGTTGAGGGAATCTCTCGAAGATAAGAGCAAACTCTATGAAGTTTCAGTGCGGCGTCAATTCAGGTCTCAAGGTTTTTTCTCTTTCAAATTCAAAGATTATGGATGCTCAATAGACTTCGTGAAATCCCCATATCTTGTTCAAGAATGGAAAAATTCACGCAAGGGTGCAGTTCAAAGAGAAACTCTCAGGCTTGACATGATCCAAGCATCCAAGTCTCAGTATCATGATGCTGATATAATCATTTTTAACACAGGCCACTGGTGGAATCACGACAAGACAAGAAACGGCAGAAATTACTTCCAAGAAGGTAATCAGGTTTATGACAGATTACAAGTTTCTGAAGCACTAAGAAAAGCGCTTAAGACTTGGGCTAAATGGGTTGATTCCAACGTGGATAGCAAGCGTACAAGGGTCTTTTTCACTGGATTTTCAGCTTCTCATTACAGAGGGGGACAATGGAATTCTGGAGGTAAATGTGATGGGGAGAGAGAACCCATTACAAATGAGAGTTATCTAGGAGCATATCCATGGACAATGAGGATGGTTGAAAGTGTGATAGCAGAGATGAAGACACCAGTGTTTTACCTCAACATTACCAAAATGACTGATTATAGAAAAGATGGACATCCTTCAGTATACAGAGAAGCTGGTTACAATAAAGGCTTGAGGATGGTCCTGCCCCCTCAAGACTGCAGCCACTGGTGCCTTCCTGGAATTCCAGACTCCTGGAATCAGCTCCTCTATGCCACTCTACTTATAGCACACCAAAATTTTCTCATTACTCAGATTTAG 1662 0.414 MVPKYILGYAVVIAFTVLFFLICGYFLSSHDKPKYWHWMNKISTTTYLYEGLLMNQYQINDTSGKVGGIPIADFDILKRFHIGVDEYKMTNVLIMFGWAVSESSFKEENYTICSTTNAKGSSSQAISSYSRNSNAPNAATLVSLFPFSLSYWLAHRPVSFSNSHVVPKKAHSKGTFSSVTAAKRTHDNSTYKDSQVIKDLTSCDIFDGTWVHDDAEPLYQHGSCPFLDDTFNCFKNGRSDLDYVKYRWKPRGCHIPRFDGLQMLAMLRGKRVVFVGDSLNRNMWQSLVCALRESLEDKSKLYEVSVRRQFRSQGFFSFKFKDYGCSIDFVKSPYLVQEWKNSRKGAVQRETLRLDMIQASKSQYHDADIIIFNTGHWWNHDKTRNGRNYFQEGNQVYDRLQVSEALRKALKTWAKWVDSNVDSKRTRVFFTGFSASHYRGGQWNSGGKCDGEREPITNESYLGAYPWTMRMVESVIAEMKTPVFYLNITKMTDYRKDGHPSVYREAGYNKGLRMVLPPQDCSHWCLPGIPDSWNQLLYATLLIAHQNFLITQI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2290 553 Pfam PMR5 N terminal Domain 202 254 IPR025846 -
Apr9g2290 553 Pfam ABC-2 type transporter 5 57 IPR013525 GO:0016020|GO:0140359
Apr9g2290 553 PANTHER PROTEIN TRICHOME BIREFRINGENCE 165 546 IPR029989 -
Apr9g2290 553 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 255 539 IPR026057 GO:0016740
Apr9g2290 553 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 165 546 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2290 Apr-Chr9 30617170 30620433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2290 - - aprc:113874689 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2290 9 30617170 30620433 Apr9g2290 9 30617170 30620433 ECH
Apr9g2290 9 30617170 30620433 Apr1g1746 1 27190095 27193904 PCT