Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1746 ATGTCTTCTAAGAGGTCCCCACAACAATACGTGGAAGCCATGCCTGTGTTTGAGAGGGTGAAGCGTTTAAGGTTGTTCGAACCGTCTCTGGGTGTTACTGGTTTTTTTCTAGTAACTGCTTTTGTTATATTCAGTTTCTTCTACTTGGATTATAGAGAACTCGCTGGAAGGTTTATGTTGTCGGGTCAATCTCAAAGGTTTATTTGGTCGCAACAGAAGAGAGGTTCAGCAGAGGAACATGTAGAGAGGGTTGAATTTCTTGGAGAAAAGGGTGGTGGGTGTGATTTGTTTGAGGGTAACTGGGTTTGGGATGAAAGTTACCCGTTGTATCAGTCAAAAGATTGCAACTTTCTCGATGGGGGATTTCGGTGTTCTGAGAATGGAAGGCCTGATTTGTTCTACACAAAGTGGAGATGGCAACCTAAAGATTGCAACTTGCCCAGATTCAATGCAACAACGATGTTGGAAAAACTGCGAAACAAGCGCCTAGTGTTTGCTGGGGACTCAATTGGGAGAAACCAATGGGAATCACTATTATGCATGCTCTCTTCTGGTGTTCCTAACAAGGACTCAATCTATGAAGTGAATGGTAGCCCAATCACAAAGCACAAGGGGTTTTTGGTATTCAGATTCAAGGATTTTAACTGTACTGTGGAATACTATAGAGCTCCATTTCTTGTATTGCAAAGCCGGCCTCCTACTGGAACAATTGGAAAGGTTAGAACAACCCTGAAATTGGATAAAATGGATTGGAACTCTTTGAAATGGAGAGATGCTGATGTCCTGGTTCTTAACACAGGACACTGGTGGAATCATGAGAAAACCATTAGAGGGGGTTGTTATTTCCAAGAAGGTATGGAAGTCAAGTTTGAAATGAAGGTGGAAGAAGCGTATAAGAGGTCCATTGAGACAGTATTGAACTGGATGCAAAATACAGTAAATCCTAGCAAGACTCAAGTTTTCTTTCGTACTTATGCCCCTGTGCATTTCAGAGGTGGAGCTTGGAGAAAAGGTGGGAACTGTCATTTGGAAACGCTGCCAGAGCTTGGGTCCTCATTGGTGCCTAATGATAACTGGTCACAATTCAAAATAGCCAATTCAGTGTTTTTAGCACACAAAAACACCTCACAAGTTTTGAAGTTCAAGGTATTGAATGTAACTCAGATGACAGCTCAGAGAAAAGATGGGCATTCTTCTATCTATTATCTGGGTCCTGATGCGGGCCCCGCACCTTTCCATCGCCAAGATTGCAGCCACTGGTGTCTGCCTGGTGTACCTGATACTTGGAATCAGTTACTCTATGCATTGTTCCTTAAATATGCAACTTCTCATAGATCATAG 1341 0.4258 MSSKRSPQQYVEAMPVFERVKRLRLFEPSLGVTGFFLVTAFVIFSFFYLDYRELAGRFMLSGQSQRFIWSQQKRGSAEEHVERVEFLGEKGGGCDLFEGNWVWDESYPLYQSKDCNFLDGGFRCSENGRPDLFYTKWRWQPKDCNLPRFNATTMLEKLRNKRLVFAGDSIGRNQWESLLCMLSSGVPNKDSIYEVNGSPITKHKGFLVFRFKDFNCTVEYYRAPFLVLQSRPPTGTIGKVRTTLKLDKMDWNSLKWRDADVLVLNTGHWWNHEKTIRGGCYFQEGMEVKFEMKVEEAYKRSIETVLNWMQNTVNPSKTQVFFRTYAPVHFRGGAWRKGGNCHLETLPELGSSLVPNDNWSQFKIANSVFLAHKNTSQVLKFKVLNVTQMTAQRKDGHSSIYYLGPDAGPAPFHRQDCSHWCLPGVPDTWNQLLYALFLKYATSHRS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1746 446 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 27 441 IPR029962 GO:0016413
Apr1g1746 446 PANTHER - 27 441 - -
Apr1g1746 446 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
Apr1g1746 446 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 435 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1746 Apr-Chr1 27190095 27193904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1746 - - gmx:100806510 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1746 1 27190095 27193904 Apr1g1746 1 27190095 27193904 ECH
Apr9g2290 9 30617170 30620433 Apr1g1746 1 27190095 27193904 PCT