Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2268 ATGACCGCCGGAGCAATGGCCACGGCCGCCGGAGCGGCGGTGATGCTGTACCTCATACTGAAGCGGAATACAGCAAAGAAAGAAGAAGAAGAGTGGTCGAGATCGCGGAGGTGGAGGGTGAAGCCGGCTCAGGCGCCGACAACTCTGTTGGAATCGATTGCGACGTTGTCAGAGACGCTGAGGTTCACTTACTCGGAGACTCTGGGAAAGTGGCCAATCGCTGACTTAGCCTTCGGAATCAATTACTTCGTGCGCAAGCAGGGTGATTTGGGAGTTGCAAGTGTGTATGGTGGAAACGGCTGTGTAGAGCTGAAAGGAGCTGAAGTTGTTGCAGAGTTGCAAGAGCTGTTGAGGTTGTTGACGTTCTGTATGCTTTTCTCCAAGAAACCGTTTACCGAGTTTCTAGATTCTTCTGGATTCTCTTTCGACCATGTCCTTCTCCATAAGCCCAAAGCTCAGCTTCTGAAGCCTGCTTTCACAATTATACGTGATATGCAATCAAAATGTTTCCTTCTATTGATCCGGGGAACCCATAGCATAAAAGACACGCTAACAGCTGCAACGGGTGCTGTGGTCCCTTTCCACCATTCCATTTTAAATAATGGGGGCATAAGCAACTTGGTTTTAGGATACGCTCACTGTGGTATGGTTGCTGCAGCTCGGTGGATTGCTAAGCTTTGCACTCCTACACTACTTAAGGCTCTTAGTGAATGTCCTGACTTTAAAGTCAAGATTGTCGGGCACTCGCTTGGTGGTGGTACTGCTGCACTGTTAACATATATTTTAAGAGAACAAAAGGAATTATCTTCAAGCACCTGTGTCACATTTGCCCCAGCTGCCTGCATGACATGGGAGTTAGCTGAATCTGGGAAGCACTTTATCACCACCATTATAAATAATTCTGACTTGGTACCCACATTCTCAGCTTCCTCTGTTGATGATCTCCGCTCCGAGGTTGCTGCATCATCTTGGCTGAATGATTTATGGGATCAGGTCGAGCATACAAAGGTTCTGAATGTTGTCTACCGCTCAGCAACTGCACTTGGATCTCGCTTACAATCTATATCTACTGCAAAGGACAGCGTAATTGGTGCGGGTGCTATTTTGCAGCCAGTAACTAATGGCACCCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTATCAAAACTATGGGTACACGCCGTCGGAATATTAGCCCATTGCCAAACTCTAAATTAGAGAACTTCGCTGAAGCTTCTCAAGTACCCGAGAGAATGAAAGAATTTGTTCTGACCGAAACGCCTGTGCTGAGTAAGGATGAACACATCTCCTCAAGTGGAAGATATGGGCATGATGCCATAGATGAAGAGGAACAACTCATTGATGCTAATGAGTACATAACCACTTCTTCCCCGGTAGATGACATCACTGAAAGCAAATTGTGGTACGAACTAGAGAAGGAGCTTAAAAGCCGGGACAATTCCCAGAACAGTCATGCTCAGGAAGAAGAGGTAGCTGCTGCAAAAGAGATAATTGAAGAAGAGAATCAGCTTATTGATGCTGCACAAGGTAGCAGCCATCCAATCACAGCATCTGACGACTTGGATAGCTGTCGTTTTTATCCACCAGGTAAAATCATGCATATTGTCTCCTTACCCTCGTCTGATGACTCTACTTCAAACTCCGTTGAGGACCATGTCAACTTGTATGAAACGCCTAGAAAGCTGTATAGCAAGCTCAGACTTTCAAGAACGATGATAAATGATCATTACATGCCCATGTATAAGAAGATGATCCAATTATTAATCCAACAACTAGAGAAAGATGATACTGTGAAATAG 1830 0.4557 MTAGAMATAAGAAVMLYLILKRNTAKKEEEEWSRSRRWRVKPAQAPTTLLESIATLSETLRFTYSETLGKWPIADLAFGINYFVRKQGDLGVASVYGGNGCVELKGAEVVAELQELLRLLTFCMLFSKKPFTEFLDSSGFSFDHVLLHKPKAQLLKPAFTIIRDMQSKCFLLLIRGTHSIKDTLTAATGAVVPFHHSILNNGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALSECPDFKVKIVGHSLGGGTAALLTYILREQKELSSSTCVTFAPAACMTWELAESGKHFITTIINNSDLVPTFSASSVDDLRSEVAASSWLNDLWDQVEHTKVLNVVYRSATALGSRLQSISTAKDSVIGAGAILQPVTNGTQVVMKRAQSVAEAVIKTMGTRRRNISPLPNSKLENFAEASQVPERMKEFVLTETPVLSKDEHISSSGRYGHDAIDEEEQLIDANEYITTSSPVDDITESKLWYELEKELKSRDNSQNSHAQEEEVAAAKEIIEEENQLIDAAQGSSHPITASDDLDSCRFYPPGKIMHIVSLPSSDDSTSNSVEDHVNLYETPRKLYSKLRLSRTMINDHYMPMYKKMIQLLIQQLEKDDTVK* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2268 609 CDD Lipase_3 168 308 - -
Apr9g2268 609 Pfam Lipase 3 N-terminal region 42 117 IPR005592 GO:0016042
Apr9g2268 609 Coils Coil 494 514 - -
Apr9g2268 609 SUPERFAMILY alpha/beta-Hydrolases 138 310 IPR029058 -
Apr9g2268 609 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 606 - -
Apr9g2268 609 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 606 - -
Apr9g2268 609 Gene3D alpha/beta hydrolase 111 344 IPR029058 -
Apr9g2268 609 Pfam Lipase (class 3) 172 308 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2268 Apr-Chr9 30455821 30459720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2268 1 605 Acyl Lipid Metabolism Gene Families AT4G16070 59.939 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2268 - - gmx:100801263 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2268 9 30455821 30459720 Apr9g2268 9 30455821 30459720 ECH
Apr9g2268 9 30455821 30459720 Apr1g2118 1 30649442 30654247 PCT