Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2118 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGAGCGGCGGTGATGCTCTACTACGTGCTAAGTCGGAGGCTGGCGAGAAAGGCGGAGGACGACGGCGAGGACCACGCCGGCGGCGACGTGTCGAAATCGAGTAGATCGCTTCGCCGGAGAAGATTTTCCCGGCGGCCGGCTCAGGCGCCGGCGACGCTGCTGGAATCGATCGTGACGTTGTCAGAGACGTTGAGGTTTACGTATTCCGAGACCTTCGGAAAATGGCCCATCGGCGATTTGGCCTTTGGTATCAACTACTTTATGCGGAAGCAGGGTAATTTGCGAGTTGCGAGTGTGTATGCGGGTAGTGATTGTGTACAGCTGAAAGGGGATGAAATAATTGTGGAGCTTTATGAACTGTTGAGGCTTTTGACACTGTGTATGCTTTTCTCCAAGAAGCCGTTTCCTGTTTTTTTAGATTCTGCTGGATTTTCCCTTGATGATGTGCTCATTCAGAAGCCTAAAGCTGGGCTTCTGAAGCCCGCATTCACAATTATACGTGATACGCAGTCAAAATGTTTACTTTTATTAATCCGGGGTACACATAGCATAAAAGACACCCTGACAGCTGCAACTGGAGCTGTTGTCCCTTTCCACCATTCAGTTTTAAATGATGGTGGGATAAGCAACTTAGTTTTAGGATATGCACACTGTGGCATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTTCTTAAGGCTCTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTCGGTGGTGGTACTGCTGCACTGTTAACATACATTCTTAGAGAGCAGAAAGAGTTGTCTTCAAGCACATGTGTCACATTTGCCCCAGCTGCCTGTATGACATGGGAGTTAGCAGAATCGGGCAAGCTCTTTATAACTACCATCATAAATGGTTCTGACTTGGTGCCAACATTCTCAACTTCATCTATTGATGATCTCCGTTCTGAGGTCACCGCATCCTCATGGTTGAATGATTTGCGGGATCAAGTAGAACATACAAAAGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCGCTTACCATCTATATCTAGCGCAAAAGCTAGGGTAGCCGGTGCTGGTGCTATTCTGTGGCCTGTAACCAGTGGCACTCAGGTTGTGATGAGACGCGCACAAAGTGTTGCTGAAGCTGTTGTTAGAACTCGATCATCATTGTCATCATGGTCTTGCATGAGTGCACGGCGCCGAAACGTGAGTCCATCGTTAAACTCTAAAACAGAGGACTTAACTGAAGTCTCTTTAATATCTGACAGAAGCCCTGAATCTCTATTGACCGAAGGGGTTGTAAGAGAGCCTATGCTTAAGGATGAAAGTATATGCTCAAGTGGAGGATCTGGGCATGATGACACAGATGAGGAGGAACAACTGGTTCCTGCTAATCAAGACATTACAGCATCCACTGTAGGTGACATCACAGAAGGGCAGTTATGGTATGAACTGGAGAAGGAGCTTCAGAAACAAGATGATAGCATGAATATTCATGCTCAAGAAGAGGCTGCAGCAGCAAAAGAGATCACTGAAGAAGAGAATCAACTTGTTGATGCTGCAGAATGTAGCAATTCAATCACAACATCAGACAACATGGACAACCATCGATTTTATCCCCCTGGAAGGATTATGCATATTGTCTCTATTCCTTCTTCATCTGATGAGTCAAGTTCAAATTCAAATTCTGATGACCCAGTAGAAGAACATGTCTGCTTATATGAAACACCTAGAGAGCTGTACAGCAAGCTGAGACTTTCAAGAACGATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTTTTAATCCGAGAACTAGAGATGGATAGCAGCTGTAATATTTTAAAGTGA 1926 0.4605 MAAGTMATAAGAAVMLYYVLSRRLARKAEDDGEDHAGGDVSKSSRSLRRRRFSRRPAQAPATLLESIVTLSETLRFTYSETFGKWPIGDLAFGINYFMRKQGNLRVASVYAGSDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKELSSSTCVTFAPAACMTWELAESGKLFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMRRAQSVAEAVVRTRSSLSSWSCMSARRRNVSPSLNSKTEDLTEVSLISDRSPESLLTEGVVREPMLKDESICSSGGSGHDDTDEEEQLVPANQDITASTVGDITEGQLWYELEKELQKQDDSMNIHAQEEAAAAKEITEEENQLVDAAECSNSITTSDNMDNHRFYPPGRIMHIVSIPSSSDESSSNSNSDDPVEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEMDSSCNILK* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2118 641 MobiDBLite consensus disorder prediction 30 46 - -
Apr1g2118 641 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 635 - -
Apr1g2118 641 Gene3D alpha/beta hydrolase 157 358 IPR029058 -
Apr1g2118 641 MobiDBLite consensus disorder prediction 30 54 - -
Apr1g2118 641 Pfam Lipase 3 N-terminal region 51 125 IPR005592 GO:0016042
Apr1g2118 641 CDD Lipase_3 177 328 - -
Apr1g2118 641 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 635 - -
Apr1g2118 641 SUPERFAMILY alpha/beta-Hydrolases 157 324 IPR029058 -
Apr1g2118 641 Pfam Lipase (class 3) 186 322 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2118 Apr-Chr1 30649442 30654247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2118 1 635 Acyl Lipid Metabolism Gene Families AT4G16070 63.905 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2118 - - gmx:100812454 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2118 1 30649442 30654247 Apr1g2118 1 30649442 30654247 ECH
Apr9g2268 9 30455821 30459720 Apr1g2118 1 30649442 30654247 PCT