Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2244 ATGGCTGTCGTAACTAGCAACGGTAAGCGCCGCCAGCAGTGGCTGACCGCGAATCACAACTTTCCGTCGCCCAATTCTTGTAGATCGAAAAGACTCAGAGTCTCAACCATGTCCCACAGTCACACTCAACCGGTGATATCTTCGAGTAGCATGGTTTCTAGAATTTCCAGGTATCCCGAAGCCAAGCCACCATTGCACAGGGAGGTTCACGCGCCGTGTAGACCGCATAAGTTTGAATTGTCGACCAGTTCTAGAATAGAATCAAGCTTGATGGCTAGTGGTTATTCTCAGAAAGAGGAGAACTGTAACGATATGGGAAATATGTTGTGTAAAAATTACCAACGGGCAAAAAATTCTGCATTAGCTTCCATTAGGTTTTGGGAAAAGGGCAAGGAGGTGGTAGAAATGGATACTGATAGTCACAGGCGAACGGTTTCGGAAGATTCGAGTGTGGAAGAGGTTCGTTTTGTAGAAGATGGTCGAGAAGTGCGCTCTCCGATGACAGATCACAAGTGGCAAGAGAGTGATTTGGTTGTGACTGAGATAAAGGATTTGGATGTTAAGGTTGTTAATGGTGGTCCTCAGCAGCAATCAACTTCGTCCGTGGTTTCTGAGTTGACTAACGGTAATTTGAATGCGGTTAATGCTGCGAAGATGTTGGACACTTTGTCTCTAAGTCCCGAGCGTGATCTTTCAAGTGTTCATGCCTACAAGAAATTGCTTGAGGCTGTTGGTAAGCGAACGGATACAATTAACAGGCTGAAGGTTGAAATTCAACTTAACGAGAAGCGTAGGTCAACGTTTGATCTGTTGCGCCCAAAGAAGGAGCATGTAAAGGAAGAACCATTGGAACCTTTTATTCTTCTTACTAAGGAGGAAGAAGCTGAGGTTGCACGTGCCTTTGCTGCCAACAGGAAGAAGGTCTTGGTTTCCCATGAGAAGTCTAACATTGCGATTTCAGGTGAAAAGTTTCAGTGCCTTAGGCCTGGGGCATGGTTAAATGATGAGGTGATTAATTTGTACCTTGAGTTACTGAAAGAGAGGGAGAGAAGGGAGCCGCAGAAGTTTCTGAACTGCCATTTTTTCAATACCTTTTTCTACAAGAGGTTAACAAGTGGCAAGAATGGTTATGATTTCCAATCTGTGAGGAGATGGACCAGCCAAAGGAAATTGGGATATGGCTTACATGAATGTGATAAAATATTTGTACCTATCCATAAAGAGATCCATTGGTGCTTGGCTGTTATCAATAAGAAAGATAGGAAATTTCAGTATCTGGACTCGCTGAGAGGAATGGATATCCAAGTGCTGAAAATGCTGGCTAGATATTTTGTAGATGAAGTAAAGGACAAGACTGGAGAAGATTTTGATGTAAGCTCTTGGGAAAGAGAATTTGTTGAAGACCTTCCTGAGCAGCAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATACGTTGACTTCTATAGCAGAAACGTGGGGCTGTGTTTCAGCCAGGAACACATGCCTTACTTCCGGCTCAAAACAGCTAAGGAAATCTTGAGATTGAAAGCTGACTAA 1560 0.4353 MAVVTSNGKRRQQWLTANHNFPSPNSCRSKRLRVSTMSHSHTQPVISSSSMVSRISRYPEAKPPLHREVHAPCRPHKFELSTSSRIESSLMASGYSQKEENCNDMGNMLCKNYQRAKNSALASIRFWEKGKEVVEMDTDSHRRTVSEDSSVEEVRFVEDGREVRSPMTDHKWQESDLVVTEIKDLDVKVVNGGPQQQSTSSVVSELTNGNLNAVNAAKMLDTLSLSPERDLSSVHAYKKLLEAVGKRTDTINRLKVEIQLNEKRRSTFDLLRPKKEHVKEEPLEPFILLTKEEEAEVARAFAANRKKVLVSHEKSNIAISGEKFQCLRPGAWLNDEVINLYLELLKERERREPQKFLNCHFFNTFFYKRLTSGKNGYDFQSVRRWTSQRKLGYGLHECDKIFVPIHKEIHWCLAVINKKDRKFQYLDSLRGMDIQVLKMLARYFVDEVKDKTGEDFDVSSWEREFVEDLPEQQNGYDCGVFMIKYVDFYSRNVGLCFSQEHMPYFRLKTAKEILRLKAD* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2244 519 Gene3D Adenoviral Proteinase; Chain A 286 517 - -
Apr9g2244 519 SUPERFAMILY Cysteine proteinases 285 517 IPR038765 -
Apr9g2244 519 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 518 - -
Apr9g2244 519 Pfam Ulp1 protease family, C-terminal catalytic domain 332 513 IPR003653 GO:0006508|GO:0008234
Apr9g2244 519 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 518 - -
Apr9g2244 519 ProSiteProfiles Ubiquitin-like protease family profile. 317 489 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2244 Apr-Chr9 30285771 30290904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2244 K08592 - gmx:100805645 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2244 9 30285771 30290904 Apr1g2148 1 30958699 30966292 PCT