Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2228 ATGGAACAGAGAACACTAGAACTCAACATCACATCGGCCAAGGATCTCAAAGATGTCAATCTATTCTCCAAGATGGACGTATACGCCGTCGTTTCAATCTCCGGCGATCACCACCATAAGCAAAAGGCCAAGACCCCCGTCGACAGAAACGGCGGCACCAACCCCACCTGGAACTTTCCCGTCAAATTCACCCTCAACGAAACGCTTGCGTTCCAAAACCGGTTAACCCTTGATATCACCCTCCGGTGTGAGCGCACACTCGCCGCCGACAGAGACATCGGTCAAGTCCACGTGCCTCTCAAGGAACTCCTCGACCAAACCGGCGACGGAAAATCCTTCCAGCATGTCAGTTACCAGGTCAGAAAACCCTCCGGCAAGCCCAAGGGTGCCTTCAATTTCTCCTACAAATTCGGAGAAAAATTCCCTGCTCCGACGAAACCGGCCGCGGCGGCTCCCAAGGCGGAGCCGGTCACGGCTTACCCTGGTCCGGCAACGAGTTCCGCTTCCGCGCCCTACGCCGCAGGGTATCCTCCACCGCCGCCGCAATATGCGACAGGATATGGGTCATATCCTCCTCCGCCGCCGCAGCAACCGGGTTACGGGTACCCACCACAACCCGGGTATGGATACCCACCACAACCAAGTTACGGGTACCCGTCACAGTCCGGGTATGGATACACAGCACAAGCAGGGTACGGGTACCCTGCTCCTCCTCCAAGAGTTCAGAGAGCGGGGAAGAACAATTTTGGAATGGGATTGGGGGCAGGGTTGCTTGGGGGTGCATTGGGTGGGCTTCTCATTGGGGATATGATATCTGATGCAGGTGCATACGATTCTGGTTATGATGCTGGTTTTGGCGATGCTGGTGGATTTGGTTTTTAA 882 0.5556 MEQRTLELNITSAKDLKDVNLFSKMDVYAVVSISGDHHHKQKAKTPVDRNGGTNPTWNFPVKFTLNETLAFQNRLTLDITLRCERTLAADRDIGQVHVPLKELLDQTGDGKSFQHVSYQVRKPSGKPKGAFNFSYKFGEKFPAPTKPAAAAPKAEPVTAYPGPATSSASAPYAAGYPPPPPQYATGYGSYPPPPPQQPGYGYPPQPGYGYPPQPSYGYPSQSGYGYTAQAGYGYPAPPPRVQRAGKNNFGMGLGAGLLGGALGGLLIGDMISDAGAYDSGYDAGFGDAGGFGF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2228 293 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 140 IPR035892 -
Apr9g2228 293 Gene3D C2 domain 1 159 IPR035892 -
Apr9g2228 293 PANTHER OS01G0934100 PROTEIN 1 285 - -
Apr9g2228 293 Pfam C2 domain 5 113 IPR000008 -
Apr9g2228 293 PANTHER INGRESSION PROTEIN FIC1 1 285 - -
Apr9g2228 293 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Apr9g2228 293 MobiDBLite consensus disorder prediction 183 207 - -
Apr9g2228 293 SMART C2_3c 5 112 IPR000008 -
Apr9g2228 293 CDD C2_SRC2_like 5 133 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2228 Apr-Chr9 30186159 30187562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2228 - - aprc:113847350 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2228 9 30186159 30187562 Apr1g2160 1 31061984 31063838 PCT