Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2160 ATGGAATTCAGAACCCTTGAACTCAACATCATATCCGCAAAGGACCTCAAAGTTGTTAATCTCTTCTCCAAGATGGACGTATACGCCGTCGTTTCACTCGCCGGGGACTCCCTTCACCCTCAAACTGCCAGGACCCACGTCCACAAAGACGGTGGCTCCAACCCTACGTGGAACTTTCCGGTGAAATTCTCCGTCAACGAATCGCTGGTGCAGCAGAACCGTTTATTCCTCGAGGTCAAGCTCATCTCCGACCGTACCCTCGCCGGCGACACCCTCATCGGCACCGTTCACGTCCCCCTTAGGGAAATTATCGACAACGCCGGGGACGGGGGTTCATTCCGGCAAGTCAATTACCAGGTGAGGACTCCATCCGGAAAATCCAAGGGTTCCTTAAATTTCTCCTATAAATTGGGCGAACGCCTTGCCGCTCCAGCGACCAAGGCGGCGCCGGAGCCGGTGATGGCTTATCCTCCTCCGGCGACGGCCGCAGGGTCTAGTTCGGCGCAGTATGGAGCGCCGTACCCTCCGCCGCCGCAGCAGCACCAATATCCGGCTGGATATGGGTATCCGCCGCCACCGCCGCCTTACGGTGGATACCCACCGGCTCAATCGGGTTACGGCTATCCGCCGCAAGCGGGTTATGGGTATCCACAGGCTCAGAAACCGAAGAAGAATAAGTTTGGAATGGGGTTGGGGGCTGGGTTGCTTGGTGGTGCCTTGGGTGGCATGTTGATCGGAGACATGGTATCTGATGCTGATACTTATGATGCTGGCTATGATGCTGGTTTTGATGATGCTGGTGGATTTGATTTTTAA 816 0.5564 MEFRTLELNIISAKDLKVVNLFSKMDVYAVVSLAGDSLHPQTARTHVHKDGGSNPTWNFPVKFSVNESLVQQNRLFLEVKLISDRTLAGDTLIGTVHVPLREIIDNAGDGGSFRQVNYQVRTPSGKSKGSLNFSYKLGERLAAPATKAAPEPVMAYPPPATAAGSSSAQYGAPYPPPPQQHQYPAGYGYPPPPPPYGGYPPAQSGYGYPPQAGYGYPQAQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDADTYDAGYDAGFDDAGGFDF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2160 271 PANTHER INGRESSION PROTEIN FIC1 1 186 - -
Apr1g2160 271 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Apr1g2160 271 MobiDBLite consensus disorder prediction 171 200 - -
Apr1g2160 271 MobiDBLite consensus disorder prediction 159 204 - -
Apr1g2160 271 SMART C2_3c 5 112 IPR000008 -
Apr1g2160 271 Gene3D C2 domain 4 137 IPR035892 -
Apr1g2160 271 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 137 IPR035892 -
Apr1g2160 271 Pfam C2 domain 5 111 IPR000008 -
Apr1g2160 271 PANTHER PROTEIN SRC2 1 186 - -
Apr1g2160 271 CDD C2_SRC2_like 5 133 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2160 Apr-Chr1 31061984 31063838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2160 - - gmx:100217337 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2160 1 31061984 31063838 Apr1g2160 1 31061984 31063838 ECH
Apr9g2228 9 30186159 30187562 Apr1g2160 1 31061984 31063838 PCT