Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2220 ATGCAAGCCAATACTGAGTTCGAGGAAGGAGAGGCTTTCTGTTATAAGGACGATGACGACCACATTGACCTTGATTCTCTATCTTACATTGATGAGAGGATTCAGCATGTTCTGGGTCATTTTCAAAAGGACTTTGAAGGTGGTATTTGTGCTGAGCGTTTGGGTGCTAAATTTGGTGACTATGGCTCCTTCTTACCTACATATGAATGCTCTCCTCCTTTTCGATCTTGTCCAAAGACTACACAAAAACACTACAGTTCACCGAAACCTCCTAGCAATCTCCACATGGTGGCTGCATTTCATCACTCAAAAGCATCTTCAAATATGCCTTCTTCTATGAGGCTTAGAACTGCTTCCCATAATGCTCATCCATTTCATAACTTAAGGGTACCTTCGATAGATAACTCAGCAAAGAAGAACACAAGAATTTCTTCCAATGAAGAAATGGAGAAGTGCACTTTGAAAGCTCATTCTGAAAATAAGTCAGGAAGTTTGACTGACCAAAGAACACTGAAGTTGCGAATCAAAGTGAAATCAGATATCTTAGCAAAAAAGAATGCAGCAATTTACAGTGGTATCGGACTTGATAACTCTCCATCTTCATCAATGGGGAACAGCCTTGAGGAAAGTGAAGACATGCCGCCTGTATCTCAAGAGACCCCTGAAGAATCTCCCACAAGCATGGTTCAGGTTATGACATCCTTTGCTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGACCGCTCTACTTGATAAGAAAGGATAAAGTTCTTGTAGACAGCAGACATGTGTCTTCTCTTAATGGTCATGAAGAGCATTATTCCATGTCTACTGATGAATCAGATTCTCTTGTGGGGGATAGACATATGTCAAAGAAAAGGAAAGTGACATCGGTGGACCAAAGTGAGAAACAGCACATGGATGTTAACTGTTCTGAGAATGATATGGCATTACATATGAAGAAAAGATTTGGAAATAGAACTCCAGATCGTAAGGACTTTCTCTCTAATGACTTGAAATGTACACCTCTGTCAAGTTCAATTTGTGATGTTGGTGAAACAACTGAAGTTCAGTGTAAGGCTTTCGAAGTCTCCAAGGGGGTCAATAAAGATGGGGTGGAATGTAGAATGGTTTTAAGTGAAGCAGCGAAGGAGGATTCACTGGAGTCAATATCTGGTCAGGATTTTAACAAGATTCAGAAGCAAAATACAGGAAATAGCTTCGTGAAAATAGTTATGGATCATAAACCGGAAACTACCCAAAATAATAATTCTACTGATCCTAAGAATAACATCAGGTGTAATGTTTTTGCAATTTCAAAAAAGGTTAAGCGTGATGCAGTGAAATGTAAGGTGGATCAAGATACTCAGAAGTGTGAAACTAATCAGAAAGGAAAGGTAAAATCTGAGAGCAAGAATAAGTCAAAAGGTGAACGAAATCCTGGAAAAGTTATGACTGCAGCAGAAAAAGATAGCGTGGGTACTAGTTATCATACAGTGGTAACTGATGGAAAGAGTGCTGGCTTTGGTATTATTTCTGGTCAAAGTAAAATGAATAAAATAAAGTCACTGAAGGATAATAAGGTCAGACAACGTGGCACAGATTCATTGAATGGAAAAAATTCAGAATGGAAAGTTGATGCAATAGATGAAACAGATGGGCCTCCTCTTAGTAAGGTTACTATAAATGCTAACCTTGACAATGTTGAAGCAAAGAGTGCATACAAGGTTAAAGTAAAGGAAAAGCTAAGTGACAATAAAGTGGTTAATCAGTTGTTAGCTGAGTCATGCGTAAAAGATGCTCCGGGTGCATTTGCTATTGCTGAAAATAAACCAACTTCTGAGGTGGTTCCACCATCAGCAGCAGCTGCACCTCAACTTATTGAAGAAGATTGGGTATGCTGTGACAGTTGCCAAAAATGGCGGCTTCTACCTATGGGTTTAAAGCCAGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTCCCTGGAATGAATCGGTGTAACATCAGTGAGGAAGAGACAACAAAAGCACTTTATGCCTTATATCAAATGCCTATTACTGAGGGCCAAAATAACATGCAAAGTAATGCCACCAGACCTGAAACCAGAGTGAGATCTGTTGATGCTCTGCAGCTTGGCCTGAATTACAAAAAGTCCAGTTCTGATGGAATGTTTGATCAACAAGGAAAGAAGAAACTTGGTATTAAGGGAAAGGCAAAGACAGGAATCAATAACAACATTCATCAATTTTCAAACACTGAAAAGAACAATGCTCTAGACTCTGTAAAAAATAGAAGCTTGATTAACATGAATCAGAAGCGTGCAGACTCAAACTGTGTGAAGAAATCTAGTTCTAAACATTTGAGTAAGTTGAAAAATTTGATAGAAGAGAAAAACACACGTAAAGAGAAAGAAAAGCAAATGAATGGAGGTGACAGGAATTCTGTTAAGTTGAAACTTAAAATGGAGGCTAATGAATACAGATCTGAAACTTCAAAGAAATCTAAGACTGAAGATGTTTGCCATGCTGATAAACAACTGAATTCTGACATGGAATTTGAAAAGAAGGATCTAAATTCAAGAAATGGTTTTTCAAGAAAGTCCAGTGGGAAGGATACGAGGAAATATGATGATTATTGTTTGCCTGACAATCTACAGGACAAGCTGGTAGTTCCAGTAAAGAAAAGAGACCAGGCACAATTTTCGTCAGATGATGGTTCATTAGATGCAACTAACTGTACCAAAAATAGTTTGATTAAGAAAAGGAAATTGCGAGACTGGCTCAGTAATGAGAGACATAACAATGCATTGTCCATAGAAGGTGACAAGCAATGTGGGGAGGAGGGCGAAGTAAGTGGATTTATGAAGGAGAAGAAGTATATAGTTTTGAATACTAAGGCAAAATCAGTAACTGAAGGTGATGATGAATTGAGTGGAGAAAGTGGAATGAAGCAAGGTTTCTTGTCAGACAGCAGGGACCAAATGACTGTTGGGACAGAGGTGAAAAGTGTTGATAAGGCCTGGCAGCCAAGGAAGCACCAGAAAAATGTTACTTCTTACCAAGCTTTGGATTCATTGGGGAAGGATTTGGGCTCTGGACAAATTTCATTGGCAGCAACTTCTAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAACTAACCTTGAAGATGTGAGAGGCTCACCAGTTGAATCTGTTACCTCGACACCTTTGAGGACTTCCAACTTGGACAGGCGTAGTTTGGCAACCGGGCACATATCAGAAAAAAATGGTGCTAGAAAAGGTGGTCTCTTGTCAATGAGTTCCAAAAAAAGTTTGGATAACAGGGAGGGAAAGTTATCACTGAAACTGAAGGATAAGAGGGTTTCATATAGCCTATATCCTACACAACATGGTCATTGTGGCAATGGTTTGCATCATGAGGAGAAAGTGAGCAAGATTAATCAGGAAAATGCACTTTCTTGGCAGAAATCTGGTAAGATTACATCATTACGGGTTAAGGAAAAGGGCAGAAGTTCTGGTCCTGAGGTTAATAGGGATAAAGTGAAGGTTTCAGCTTCTGATAATGGTTTTTCCAAAAACGGTGAGAGTTATGAGTCAGCAGGTGATGCTAGTCATCACGTTTCTGGTACTGAGACAAGAAATGAAATTAAAAAAGGTTCTCCAAAGTTCAACCTTCGCGAGAAAAATTCAAGGCATTTGTCAAAAGAAACTGGTAAACAAACTGAGCTAAAACAAAAAGATTCAGCAAATTCAGTTCTGAAAGCAGATGCTCCATGTAGCACTAACAGAAAGATTATCTCTCAGCAGAACCTAAGTCAGAACTTTAAGGAAGAAAACAAAGCTAATCCGGTATACACTGGATCAAGAGATGGGAAAACTAAAGTTTTCTCATCTTCAGAGGGTGAAGCAAAAAGGGAAACATTGTATGTAGGTTCCAGAATTGCACCTGGATCGCAGAAGGGAGATATGTCTAATGGGCATCCAGCTCATGCATCTGGCAATGGTGATGTCACCAAGTTAGTGAGAAATTCAGTTGATATTAGTTGCAATGTTGGAGTTAATTGCATTTCAGGAAGTTACGCACCTGATGGACAGCTCAGTGAGTCAAGTCCCTCGACTACATATTCTGGCCAAACTGCCTTTAGCATTCTGGAAGAAGCCAAAAAACTAAAAGATTCCGCAGATCATTATAAGAACTCTGGGTTTGAGTTTGAAAGTAATGAGACTTATTTTAAAGCTGCCTTGAAGTTTCTGCATGGAGCATCACTTCTAGAAAATTGTCACAGCGAGGGTAGCAAGCACAGAGAGACGAATCAAATGCAAATATATGCTACTACTGCTAAACTTTTTGAATCCTGTGCCCGTAAATATGAAAGACGCCAAGAAATGGCTGCAGCTGCTTTGGCATATAAATGCATGGAGGTGGTATACATGAGACTGGTTTACTGTAAACATTCTAGCATAAACAAGGATTGGCATGGGTTGCAATCAACTCTACAAATGATTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCTGACATTGATAATTTAAATAACCTGGCGGTACTGGATAAGGCTACTTTGAAAAGGGGTACTAATACTCATGTTGCAAATAATCAAGTCTTATCTGCTCAAAATTGCCCAAATATTGTCAGACTTCTCAATTTTACTCAAGACATAAGTTTTGCAATGGAGGCTTCTAGAAAATGCCAGAGCACTTTCATGGCTGCCAATTTGATCATGGAAGAGGCACAGAATAGGGATTGCATAACTTTGATTAGGAAGGTTGTTGATTTCAACTTCCAAGATGTAGATGAGCTTGCACATCTGGTTTTGATTGCAACAAAAGCAATAACTCATGCTGGTCTAGGTGGTGTTAGAGATTAA 4914 0.3932 MQANTEFEEGEAFCYKDDDDHIDLDSLSYIDERIQHVLGHFQKDFEGGICAERLGAKFGDYGSFLPTYECSPPFRSCPKTTQKHYSSPKPPSNLHMVAAFHHSKASSNMPSSMRLRTASHNAHPFHNLRVPSIDNSAKKNTRISSNEEMEKCTLKAHSENKSGSLTDQRTLKLRIKVKSDILAKKNAAIYSGIGLDNSPSSSMGNSLEESEDMPPVSQETPEESPTSMVQVMTSFAIPGGVLISPLHDRPLYLIRKDKVLVDSRHVSSLNGHEEHYSMSTDESDSLVGDRHMSKKRKVTSVDQSEKQHMDVNCSENDMALHMKKRFGNRTPDRKDFLSNDLKCTPLSSSICDVGETTEVQCKAFEVSKGVNKDGVECRMVLSEAAKEDSLESISGQDFNKIQKQNTGNSFVKIVMDHKPETTQNNNSTDPKNNIRCNVFAISKKVKRDAVKCKVDQDTQKCETNQKGKVKSESKNKSKGERNPGKVMTAAEKDSVGTSYHTVVTDGKSAGFGIISGQSKMNKIKSLKDNKVRQRGTDSLNGKNSEWKVDAIDETDGPPLSKVTINANLDNVEAKSAYKVKVKEKLSDNKVVNQLLAESCVKDAPGAFAIAENKPTSEVVPPSAAAAPQLIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKALYALYQMPITEGQNNMQSNATRPETRVRSVDALQLGLNYKKSSSDGMFDQQGKKKLGIKGKAKTGINNNIHQFSNTEKNNALDSVKNRSLINMNQKRADSNCVKKSSSKHLSKLKNLIEEKNTRKEKEKQMNGGDRNSVKLKLKMEANEYRSETSKKSKTEDVCHADKQLNSDMEFEKKDLNSRNGFSRKSSGKDTRKYDDYCLPDNLQDKLVVPVKKRDQAQFSSDDGSLDATNCTKNSLIKKRKLRDWLSNERHNNALSIEGDKQCGEEGEVSGFMKEKKYIVLNTKAKSVTEGDDELSGESGMKQGFLSDSRDQMTVGTEVKSVDKAWQPRKHQKNVTSYQALDSLGKDLGSGQISLAATSSSSKVSGSHKARTNLEDVRGSPVESVTSTPLRTSNLDRRSLATGHISEKNGARKGGLLSMSSKKSLDNREGKLSLKLKDKRVSYSLYPTQHGHCGNGLHHEEKVSKINQENALSWQKSGKITSLRVKEKGRSSGPEVNRDKVKVSASDNGFSKNGESYESAGDASHHVSGTETRNEIKKGSPKFNLREKNSRHLSKETGKQTELKQKDSANSVLKADAPCSTNRKIISQQNLSQNFKEENKANPVYTGSRDGKTKVFSSSEGEAKRETLYVGSRIAPGSQKGDMSNGHPAHASGNGDVTKLVRNSVDISCNVGVNCISGSYAPDGQLSESSPSTTYSGQTAFSILEEAKKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLLENCHSEGSKHRETNQMQIYATTAKLFESCARKYERRQEMAAAALAYKCMEVVYMRLVYCKHSSINKDWHGLQSTLQMISQGESPSSSASDIDNLNNLAVLDKATLKRGTNTHVANNQVLSAQNCPNIVRLLNFTQDISFAMEASRKCQSTFMAANLIMEEAQNRDCITLIRKVVDFNFQDVDELAHLVLIATKAITHAGLGGVRD* 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2220 1637 MobiDBLite consensus disorder prediction 460 487 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1171 1264 - -
Apr9g2220 1637 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1632 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 195 227 - -
Apr9g2220 1637 Pfam CW-type Zinc Finger 634 679 IPR011124 GO:0008270
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1171 1190 - -
Apr9g2220 1637 ProSiteProfiles Zinc finger CW-type profile. 628 681 IPR011124 GO:0008270
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1216 1251 - -
Apr9g2220 1637 PANTHER CW-TYPE ZINC FINGER 1 1632 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1289 1308 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1192 1215 - -
Apr9g2220 1637 Gene3D - 627 683 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1067 1088 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 978 998 - -
Apr9g2220 1637 Coils Coil 794 814 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 1045 1118 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 857 883 - -
Apr9g2220 1637 MobiDBLite consensus disorder prediction 800 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2220 Apr-Chr9 30117246 30126683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2220 - - gmx:100793863 2216.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2220 9 30117246 30126683 Apr1g2171 1 31187757 31197289 PCT