Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2171 ATGGAAGACAATACTGAGCTTGAGGAAGGAGAGGCTTGCTATTATAAGGATGATGATGAAGGCAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAACATGTTCTTGGTCACTTTCAAAAGGACTTTGTAGGTGGTGTATCTGCTAAAAATTTGGGTGCAAAATTTGGTGACTATGGTTCCTTTTTACCAACCTATGAGCGCTCCCCTTTTGTTCGGTCTCATTCAAAGACTCCACAAAGAAACCACAGCTCACCAAAATCTACTATCAATCTCCACATGGAGGCTATGTCTCATAACACAAAAGCACCTTCAAATGTGCCTCCTCTTGCAAGGCATGAAAATGCTTCCCACGGTTCACATTCATTTCATGATTTAAGAGCAACTTCAGTGAATGAATTAGTGGAGAAAGATAGAGGTATTTCTTCAAGTGATATAGCTGAGAGGTGCACTTTGAAAGATGATACTACAAAAAAGACAGGGAATTCAACTGACCAAAGAACACTGAAGTTTCGAATCAAAATGAAATCTACTATCTTAGCACAAAAAAATGCTGAAATTTACAGTGGCCTTGGGCTTGATAACTCTCCATCTTCATCAATGGGGAATAGCCCTGTGGAAAGTGAAGGCATGCAACCTGTATCTCAAGAGAATGCTGAAGATTCTCCAATTGGCATTGTTCAGGATATGACTTCCTTTCCTATCCCTGGGGGTGTTCTATCATCACCTCTACATGAAAGTTTGCTCTACTTGATAAAAAATGAAAAAGTTATTAGAAACATCAGATATATGTCTTCTCTCAACAGTCAACAAGATCCTTGTTCCATGTCGACCGATGAATCAGATTCTTTTGTGGGTGATTGGCATTTGAAGAAGAGGACAGTGAGAATAGTGAGACAAAGTGATAAGCTATTAAAATTGAAACATATGAATGGCACCCTGTCTGAGAATGATATGACGTTGCATACAAAGAAAAGGTTAGGAAATAGAACACCAGATCATAAGGAATTTTTCTCTAATGAATTGAAATGGACACCTCTGTCAAGTTCAATTTGTGATGCTGGTGAAACTGCCGAAGTCACTACTAAAACTTCTGAAGCCTCCAAGGAGGTTAATGAGAATGGGGTGCAAGGCAGAATGGTTTCTGTTGAAGCATTGAAGGAGGAATCATTGGAGTCAAGATCTGGTCAGGATTTTGCGAAAATTGAAAAGCAAAATGCAGGAAATGGTTGTATGAAAAATGTTTTGGAGTATACACTGGAAAATTCCTGCAAGGATAAGTCTGCTGACCCTATGAATAATGACAAGTGTAATACTTACACAATTTCCAATACGGTTGAACGTGATGCAGTAAAACGTAAGGTCGGTCAAAAGCCTGAGATCCACCAGAAGGTGATGGTTGTAACTGAGCGGAAGAATAAGTCAAAAGGTGGTCAGAGTCCTGGAAAAGCAGAGGCTGTTGCAAGAAAAGATAGCTTTGATGGTACTTATAATGCAATGGTAACTGATAAAGGGAGAGCTGGCTTCACTGTTACTTGTAGAAGTAAAATGAATAAATCAAAGTCACTTAAGGACAATAAGTTCACTGATAGCAACAAAGATTCATTGAAACAAAAAAAATCAGAACGTAAAGTTGACAGTCTTGCTGGTAGTGGTGCAATAAAAAACATTAACATTTGTAATAAAAAACAGAGTGTATTTGGGGCTAAAGTAAAGGAAAGACTGAGTAGCAATAAAGTGGCCAACCAGTTGCTAGCTGGGTCATGCATAAAAGATGCTTCAGGTTCACTTCCCATTGCTGGAAACAACCCTGCTCCTGAGATGATTCCATCAGCTGTAGCAGCACCTCAACTTATTGCTGAGGATTGGGTATGTTGTGACAGTTGCCAGAAATGGAGACTTCTACCTACTGGAATGAAGCCAGAGCATCTTCCAGAGAAATGGTTGTGTAGCATGCTAAATTGGCTGCCTGGGATGAATTCTTGTGACTTCAGTGAAGATGAGACGACAAAGGCACTTTACGCCTTATATCAAATGCCAATTTCTGAGGGTCCAAACAATATGCAGAGCCATGGTGCTGGAACTGTAATTGGAGTGAGCTCTACAGATGCTTTGCAATATGGCCTACATCACAAAATGTCTAGTTCTGATGTGTTGTCTGATCGAGGAAAGAAGAAACATGTTATTAAGGAAAAGACAACGTCAGGAATTAATAATGACATGGTTCAGCTCTCAAATTCTGCAAAGACCAATACTCAAGTATCTAGGAAAAATAGAAGCTTGAATGACATGAATCAACATCCTGCTGACTTAAACCCAACAAAGATGAGTTCTTCTAAACACCTTAGCAGGTTTGGCAACATGATTGAAGAAAAACATGTGCCTAAAAAGAAAGAAAAGCAAGTAAATGGAGGTGACAGAAAGCATGTTAAATTGAAGCGTAAGATGGATGCAGATCAATGTAGATCGGGAACTCCCAAGAAATCAAAAACTGAAAATGGTTGCTATGCTGATAAACAACTGAATCCTGGCACAGGCCTTGAGAAGGTGGCTCTAAATTCTACAAATGGTTTGCCAATGAAAGCTAGTCGGAAGGATATGAGGAAGTATGATGAGTATTGTTTATCTGAGGATGCACAGGACAGATTACCTGTAAAGAAAGAGGGAGATCAGGCTCAGGCCTTGTCTGGTGGTGGGTCCTTGGATGTGAAAAACAGCAGTAAAAACGGTTTAATGAAAAAAAGGAAAAGGAGGGACTGGTTGGATGATGAAAAGCATAACAACTCATACTCCTTGAACGGTGATAAGCAGCATGGTGAAGAGGGCAATGCAAATGAATTTAGGAAGGAAAAGAAGTACAAAATTTTCAATAAAGAGGCAAAATCAGTTACTGAAGGTGATGATAAATTGAGTAAAGGTGGGATGAGGCAAGTTTGCTTGTCAGGCAGTAGGGACCAAAATACTGTTGGGACAGAAGAAAGGCTTGTTGATAAATGTCAGCAGCCAAAGAAGCTAAGAAAAAATATTGCATCTCATCAAGCTTTGGATGGAACTGATCAATTGGGCAAGGATTTGGGCTCTGGACATCTTTTATTGGCAGCAACATCAAGCTCTTCTAAAGTTTCAGGGTCTCATAAAGCTAAAACCAACTTTGAAGATGTCAGAGGTTCGCCTGTAGAATCTGTTACCTCGTCACCTATTAGGGCCTCCAACTTGGATAAGAATATTTTGGTGGTGGGTGACACTTCAGTGAAAGATGATGCTACAAAAGGTGGTCTCTCTTCAGTAGGTTCCAGGAGAAGTTCAGATAATAGGGAGGGAAAGCTATCAGTAAAATTGAAGGAGGGTAGAATTTCATACAACTTACATCCTGCATCCCACAAATTATCTTCGGTGGAGTACCAGGTTGAGGATGCTAGAGATAGAACCAGGATCCAAGCTAAACATTCTTCTGAACCAAAGAATAACTATTTGCTTGAAGGTGGTGTTCATGTTGAACATGGCAATTTTCCAAATGGTATACGTCATGAGGAGAAAGTAAACAAGGACAACCAGGAAAGTGAACTTTCTTGTCAGAAATCTGGTAAGGTTACATCACTGCACAGCAAGGAAAAGGACAGGTCTGGTTCTCGTGTTGGGGCAGATAAGATGACAGTTTCAGTTTTGGTGACTGGTTATTCCAAAAATAGTGGGAGTGGGGGGTATGATTCAGCTGTTGATCCTAGTTATCAAGCATCTGGTGTTGAGACAAGAAGTGATGCCAAATATAGTTCTCCCAAGTCTAAATGCAAAATTGACAGTATTAGTCAGAAAAGTGCTTTAAGACATGGGTCAAGCGAAACAGGAAAGCAAACTAAGCCAAAATATAGGGACTTAGAGAATTCAGTTTTGAAGGTGGATGCTCAATGTAGCACTGATAGACAGACTATCTCCCAGCAAAACCTGACTTGGGATTTTGAGGAAGAAAACAAGGCTAATCATGTTAGCACAGAATCAAGAGATGGGAAATCCAAAGTTCTCTCAGCTTCTGTGGGTGAAGTAAAAAGGGAAACATTAAATGTGGGTTCTAGAACTGTACCTCAGTATCAAAAGGGAGGCATGTCTAAGGAGCAGCAATTCCATGTTCCTGGCAATAGTGATTTAACCAAGTTAACAAGAAATTGTGCTGATGTTAATAACAGTGTTGGAGGTAATTATAGTTCAGGAAATTTTGCACCTGATCACAAACTCACTGTGTCAAGTCCTTTGAGAACAAATTCTAACCAAAATGTTTCTGACACACTGGAAGAGGCCACAAAACTAAAAGATAGTGCCAATCATTATAAGAACTCCGGGTTTGATTTTGAAAGCAATGAGACTTACTTTCAAGCTGGTTTGAAGTTTCTACATGGAGCATCTCTTTTAGAGAATTGTTCCAATGAGAGTAGCAAGCATGGGGAAATGAGTCAAATTCAGATTTATGCTACTGCAGCCAAGCTTTTCAAATCCTGTGCCCATGAATATGAAAATCGCCAAGAAATGGCAGCTGCCGCTTTGGCTTACAAATGCATGGAGGTGGCATATATGAGAGTGGGTTACTGTAAACATTCTGCTGTGAGCAGAGATCGAAATGAGTTGCAACAAACTTTTCAAATGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCCGATGTGGATAACTTAAACAATCAGGCAGCAACAGATAGGGCCACTTTGCCTAGGGGTACTAATACTCATGTTGCTGTCAATCAAGTCATATCTACTCGAACTCATCCAAATTTGGTCAGGCTTCTTGATTTTACTCAGGATATACATCTTGCAATGGACGCTTCTAGAAAATGTCAGAGCACATTCATGGCTGCTAATGTGATCATGGAAGAAGCACGGAATAAGGACTGTATAACTTCTATTAGGAGCGTTGTCGATTTCAGCTTCCAGGATGTGGACGAGCTTGTACGTCTTGTTTGGATTGCTACAAAAGCCATAAGTCGTGCTGGTCTTGGTGGTGGTAGAGATTAA 5031 0.4005 MEDNTELEEGEACYYKDDDEGNIDLDSLSYIDERIQHVLGHFQKDFVGGVSAKNLGAKFGDYGSFLPTYERSPFVRSHSKTPQRNHSSPKSTINLHMEAMSHNTKAPSNVPPLARHENASHGSHSFHDLRATSVNELVEKDRGISSSDIAERCTLKDDTTKKTGNSTDQRTLKFRIKMKSTILAQKNAEIYSGLGLDNSPSSSMGNSPVESEGMQPVSQENAEDSPIGIVQDMTSFPIPGGVLSSPLHESLLYLIKNEKVIRNIRYMSSLNSQQDPCSMSTDESDSFVGDWHLKKRTVRIVRQSDKLLKLKHMNGTLSENDMTLHTKKRLGNRTPDHKEFFSNELKWTPLSSSICDAGETAEVTTKTSEASKEVNENGVQGRMVSVEALKEESLESRSGQDFAKIEKQNAGNGCMKNVLEYTLENSCKDKSADPMNNDKCNTYTISNTVERDAVKRKVGQKPEIHQKVMVVTERKNKSKGGQSPGKAEAVARKDSFDGTYNAMVTDKGRAGFTVTCRSKMNKSKSLKDNKFTDSNKDSLKQKKSERKVDSLAGSGAIKNINICNKKQSVFGAKVKERLSSNKVANQLLAGSCIKDASGSLPIAGNNPAPEMIPSAVAAPQLIAEDWVCCDSCQKWRLLPTGMKPEHLPEKWLCSMLNWLPGMNSCDFSEDETTKALYALYQMPISEGPNNMQSHGAGTVIGVSSTDALQYGLHHKMSSSDVLSDRGKKKHVIKEKTTSGINNDMVQLSNSAKTNTQVSRKNRSLNDMNQHPADLNPTKMSSSKHLSRFGNMIEEKHVPKKKEKQVNGGDRKHVKLKRKMDADQCRSGTPKKSKTENGCYADKQLNPGTGLEKVALNSTNGLPMKASRKDMRKYDEYCLSEDAQDRLPVKKEGDQAQALSGGGSLDVKNSSKNGLMKKRKRRDWLDDEKHNNSYSLNGDKQHGEEGNANEFRKEKKYKIFNKEAKSVTEGDDKLSKGGMRQVCLSGSRDQNTVGTEERLVDKCQQPKKLRKNIASHQALDGTDQLGKDLGSGHLLLAATSSSSKVSGSHKAKTNFEDVRGSPVESVTSSPIRASNLDKNILVVGDTSVKDDATKGGLSSVGSRRSSDNREGKLSVKLKEGRISYNLHPASHKLSSVEYQVEDARDRTRIQAKHSSEPKNNYLLEGGVHVEHGNFPNGIRHEEKVNKDNQESELSCQKSGKVTSLHSKEKDRSGSRVGADKMTVSVLVTGYSKNSGSGGYDSAVDPSYQASGVETRSDAKYSSPKSKCKIDSISQKSALRHGSSETGKQTKPKYRDLENSVLKVDAQCSTDRQTISQQNLTWDFEEENKANHVSTESRDGKSKVLSASVGEVKRETLNVGSRTVPQYQKGGMSKEQQFHVPGNSDLTKLTRNCADVNNSVGGNYSSGNFAPDHKLTVSSPLRTNSNQNVSDTLEEATKLKDSANHYKNSGFDFESNETYFQAGLKFLHGASLLENCSNESSKHGEMSQIQIYATAAKLFKSCAHEYENRQEMAAAALAYKCMEVAYMRVGYCKHSAVSRDRNELQQTFQMVSQGESPSSSASDVDNLNNQAATDRATLPRGTNTHVAVNQVISTRTHPNLVRLLDFTQDIHLAMDASRKCQSTFMAANVIMEEARNKDCITSIRSVVDFSFQDVDELVRLVWIATKAISRAGLGGGRD* 1677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2171 1676 Pfam CW-type Zinc Finger 626 671 IPR011124 GO:0008270
Apr1g2171 1676 MobiDBLite consensus disorder prediction 751 855 - -
Apr1g2171 1676 Gene3D - 621 675 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 523 547 - -
Apr1g2171 1676 ProSiteProfiles Zinc finger CW-type profile. 620 673 IPR011124 GO:0008270
Apr1g2171 1676 PANTHER CW-TYPE ZINC FINGER 1 1670 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1265 1283 - -
Apr1g2171 1676 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1670 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 918 934 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 788 829 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 884 950 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1201 1215 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 195 221 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1044 1068 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 751 787 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1090 1112 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1183 1216 - -
Apr1g2171 1676 MobiDBLite consensus disorder prediction 1249 1291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2171 Apr-Chr1 31187757 31197289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2171 - - gmx:102667636 2452.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2220 9 30117246 30126683 Apr1g2171 1 31187757 31197289 PCT