Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1848 ATGTTAGCACAAGGAAGAAACATGGGAAGCAGATTCACCCCATTTTTGGCCATGCTCCTATGCTTTGGAATCAACTTGGTGCAATGTGAATATTATTATTCTGAGGAAACCTCAAAGGTGGTCATGTACGTGGATTATGCCTTCACCTCAGATGAGTTCAATGGAAGCTCCATTTTCTCAACATCACACAACTATAGTAGATACAATGAAGCCATTAAAATTGAGCTCGTAGTGAGGGACATATATAGGATGCAAGAGAACATGCACCAGGGTTATCCAACTGAAACACTAGTTCGGTTTCTCAAAGCAAGGGACGGGAATGTTGCCAAAGCGCATAAAATGTTAATTGATTGCTTACAATGGAGGGTGGAAAATGAGATTGACAATGTCTTAGCGAAGCCAATCCCCCCTGATTTGTACAGAGGTTTGCGAGATTCTCAACTCACAGGAATGTCTGGTGTTTCAAAGGAGGGTCTACCTGTCATTGCTGTTGGGGTTGGACTCAGCACATTACATGAAGAGTTTGACAAATACTATATACAGTCACATATCCAAATGAATGAATATCGGGATCGGGTGATTTTGCCAACGGCTACCAAGACTCATGGACGATACATTGGCACCTGTGTAAAAGTCTTGGACATGACTGGTTTAAAACTATCAGCACTAAAACAATTGAGGCTTTTGACTTCTATATCTACAATTGACGACTTGAACTACCCAGAAAAAACAGACGCATATTATATCGTTAATGCTCCGTATGTATTCTCAGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGAAGGAAGGTCCACGTGCTGAAAGGTTGTGGGATGGAGGAATTACTGAAGGTTATGGACTATGCATCCCTCCCGCATTTTTGCAGAAAGGAGGATTCCAGGTTACCCCAAGATTATGCAGCTGGAAATACTGAAAATTGTTTCTCCTTTGATCATGTCTTCCATCAACAACTCTATAATTATATCACACAGCAAGTTATATTATTGGAGTCCATATCACAAATTAGACGTGGTTCTTTCCATGTAGAGTTACCAGAGCCAGACCCAGATGATGCCAAAATAGCCAAGACTATAGAAACTGAGTTCCACAAACTGGAAATTCAGAATGGCCTAACTAACTGA 1155 0.4087 MLAQGRNMGSRFTPFLAMLLCFGINLVQCEYYYSEETSKVVMYVDYAFTSDEFNGSSIFSTSHNYSRYNEAIKIELVVRDIYRMQENMHQGYPTETLVRFLKARDGNVAKAHKMLIDCLQWRVENEIDNVLAKPIPPDLYRGLRDSQLTGMSGVSKEGLPVIAVGVGLSTLHEEFDKYYIQSHIQMNEYRDRVILPTATKTHGRYIGTCVKVLDMTGLKLSALKQLRLLTSISTIDDLNYPEKTDAYYIVNAPYVFSACWKVVKPLLQERTRRKVHVLKGCGMEELLKVMDYASLPHFCRKEDSRLPQDYAAGNTENCFSFDHVFHQQLYNYITQQVILLESISQIRRGSFHVELPEPDPDDAKIAKTIETEFHKLEIQNGLTN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1848 384 SUPERFAMILY CRAL/TRIO domain 138 298 IPR036865 -
Apr9g1848 384 SUPERFAMILY CRAL/TRIO N-terminal domain 82 133 IPR036273 -
Apr9g1848 384 Pfam CRAL/TRIO domain 147 298 IPR001251 -
Apr9g1848 384 Gene3D - 72 320 IPR036865 -
Apr9g1848 384 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 136 318 IPR001251 -
Apr9g1848 384 PANTHER OS09G0258000 PROTEIN 83 384 - -
Apr9g1848 384 SMART CRAL_TRIO_N_2 93 118 IPR011074 -
Apr9g1848 384 Pfam CRAL/TRIO, N-terminal domain 89 117 IPR011074 -
Apr9g1848 384 SMART sec14_4 143 304 IPR001251 -
Apr9g1848 384 CDD SEC14 148 298 IPR001251 -
Apr9g1848 384 PANTHER - 83 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1848 Apr-Chr9 27236788 27242395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1848 87 376 Acyl Lipid Metabolism Gene Families AT1G55840 65.979 4.92e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1848 - - gmx:100815791 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1848 9 27236788 27242395 Apr9g1848 9 27236788 27242395 ECH
Apr10g1702 10 29889199 29893873 Apr9g1848 9 27236788 27242395 PCT