Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1846 ATGGTAGCCAAAATCAAGCGAAGTGTTACTAACTCGCCTAATCCAACAAAACCAAAGGTTGGAGAGATTGATACCAGTCTACCTTTTCAATCTGTTAAAGATGCTGTTTCTCTATTTGGTGAAGGCGCTTTCTCTGGCGAAAAACCTTCCATTAAGAAGCCAAAACCTTATTCTGCTGAGAGTGTTTGGGCCAAGGAGACACAACTTCACTCAGCCCAGAAAGAGCTGAAAAAATTGAAGGAACAGCTAAAGAATGCGGAAACTACCAAGGCTCAAGTCCTGGTGGAGCTTGAAAAGTCTAAAAGAGAGGCTGAGGATCTGACACAAAAGCTTAAAGTTCTGAGTGAATCCAGAGAATCAGCAATTCAAGCAACAGAAGCTTCAAAAAATCTAGCAAAGCAGCTTAATGAAGAAAAATGTGGCAATCTTGATGGAACAAATGGTGCTTGGAAAGAAGAGTTAGAAACTGCCGTTAAAAGGTATGCATCTGTCATTATAGAACTAGATGTTGCAAAGCAAGAACTGAGGAAAATTCGTCAAGGGTATGATTCATCCTTGGAAGCAAGAGTTTCTGCCCTCCAGCAAGCAGCAGAAGCTGAAGATGCAATGAAGGCAAACACCGAAAGAGCGTCAGAACTCTCCAAAGAAATTTTAGCTGTACAGGACTCAATTGAGCATATGAAGGTTGCATCTGTTCAAGCACATCAATATGAAGAAGAGATATTCGCTGAGCAAAATGTTCTAAGACAATCATATGAATCCACCCTTGAAGAATCGAAAAAGAAGGTGCTTGATTTAAAAAGGGAATTCAATCCAGACCTTACCAAAAATCTTGAAATGCAACTGACTGAGACAACGAACGAAATTGCGACTCTCCAAAAGCAAATAGAAAATAAAAAGACATCAGATTTGGACTCTTTGAGAAGTGTCACCCTGGAGCTTGATGATGCTAAAGAATCACTACAGAAAGTAACAGAACAGGAAAACTCCCTTAGAAGCTTGGTGGAATCTCTTAGAGTGGAGCTAGAGAATGTAAAAAGAGAACAGTCTGAATTGAAGGAGAAAGAATCCCAAACTGAATCCATTGTTAGGAATCTGCAGGTAGAACTCAAGAGAAATGAGTCTGAGCTTGAATTCTACTTGGCAGAAGAATATAAAGCTAGAGGTGCGTCAGGGGAAATGATCTTGCAACTGAATCAGTTGTCATCTGAAACTGAAAATGCAAGGCGTGAAGCAGAAGATATGAAGAACATGGCAACAGAATTGAGGACTGAAGCTGCAGTCTCCAAACTCGTGTTAGAAGATGCTGAAGTAAAGCTTAAAGTAGCATTGGAAGAAGCAGAAGCAGCAAAAGCAACAGAGGCAAATGCTCTTGATCAGATCAGGATCTTATCTGAGACGACTAGCGCTGCTCACTCATCAACTTCTGAAGCTAGTGCAAAAATTACAATCTCAAGGGAGGAGTTTGAAATCCTAAGTCGTAAGGTTGAGAAGTCTAATAAATCAGCAGACATCAAAGTGGCTGAAGCCACAACACAGGTTGAATCTGTGAAGGCTAGTGAAAGTGATGTTCTCAAAAGGTTGGAGGAAACTCAAAAGGAGATTGGGGATATAAAGACAGAGACACAGGAGGCCTTAAAAAGAGCTGAGATGGCTGAAGCCGCCAAGAGGGCGGTGGAGAGTGAGCTTAGAAAATGGCGTGAGCGAGAGCAGAAGAAGGCGGCAGAAGCTGCAGCTAGAAAATTGGTTGAAACACCAGAACTATCTCCTCAGCACTATAGGACTCAAAAGCAGAACTCTCCTCCAAAAAAAGTGGAGATGAGGAAGCTAGAAAAAGAGAAGGTGTCAGTTTCAAAGAAAGTTCTGTTGCCTAGTATTAGTGGCATCTTCCACAGGAAAAAGAACCAGGTTGAGGGAACATCTCCTTCTTACCTGCCTGGGGAGAATACTGCATGA 1956 0.4172 MVAKIKRSVTNSPNPTKPKVGEIDTSLPFQSVKDAVSLFGEGAFSGEKPSIKKPKPYSAESVWAKETQLHSAQKELKKLKEQLKNAETTKAQVLVELEKSKREAEDLTQKLKVLSESRESAIQATEASKNLAKQLNEEKCGNLDGTNGAWKEELETAVKRYASVIIELDVAKQELRKIRQGYDSSLEARVSALQQAAEAEDAMKANTERASELSKEILAVQDSIEHMKVASVQAHQYEEEIFAEQNVLRQSYESTLEESKKKVLDLKREFNPDLTKNLEMQLTETTNEIATLQKQIENKKTSDLDSLRSVTLELDDAKESLQKVTEQENSLRSLVESLRVELENVKREQSELKEKESQTESIVRNLQVELKRNESELEFYLAEEYKARGASGEMILQLNQLSSETENARREAEDMKNMATELRTEAAVSKLVLEDAEVKLKVALEEAEAAKATEANALDQIRILSETTSAAHSSTSEASAKITISREEFEILSRKVEKSNKSADIKVAEATTQVESVKASESDVLKRLEETQKEIGDIKTETQEALKRAEMAEAAKRAVESELRKWREREQKKAAEAAARKLVETPELSPQHYRTQKQNSPPKKVEMRKLEKEKVSVSKKVLLPSISGIFHRKKNQVEGTSPSYLPGENTA* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1846 651 Coils Coil 395 425 - -
Apr9g1846 651 Pfam Weak chloroplast movement under blue light 22 572 IPR008545 -
Apr9g1846 651 MobiDBLite consensus disorder prediction 1 23 - -
Apr9g1846 651 MobiDBLite consensus disorder prediction 634 651 - -
Apr9g1846 651 Coils Coil 433 453 - -
Apr9g1846 651 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 6 627 - -
Apr9g1846 651 Coils Coil 196 216 - -
Apr9g1846 651 MobiDBLite consensus disorder prediction 628 651 - -
Apr9g1846 651 Coils Coil 275 302 - -
Apr9g1846 651 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 6 627 - -
Apr9g1846 651 MobiDBLite consensus disorder prediction 570 611 - -
Apr9g1846 651 Coils Coil 528 569 - -
Apr9g1846 651 Coils Coil 249 269 - -
Apr9g1846 651 Coils Coil 62 124 - -
Apr9g1846 651 Coils Coil 307 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1846 Apr-Chr9 27227894 27231343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1846 - - gmx:100817643 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1846 9 27227894 27231343 Apr9g1846 9 27227894 27231343 ECH
Apr10g1700 10 29874734 29880002 Apr9g1846 9 27227894 27231343 PCT