Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1700 ATGGTGGCAAAAATCCGGCAAAATGCTACGGAGTCTCCTAATCCAAAACCAGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAGAAACCTATCCATAAGAAGGCGAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAAGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCACTTGTGGAGCTTGAAAGGGCTAAAAGGACAGTTGAGGATCTAGCACAAAAGCTAAAAGTTATCAGTGAATCTAGGGAGTTGGCAATCAATGCGACAGAAGCTGCAAAGAGTCAGGCAAAACAACTTAAAGAAGAAAAGTATGGTGACCCTGATGGATCAAATGGTGCTTGGAAAGAAGAGCTAGAAGCTGCAGTTAAAAGGTATGCATCTGTCATGACAGAACTTGACGCTGCAAAGCAAGTACTGAGCAAAACTCGTCAGGAGTGTGATTCATCCTTGGATGCAAGAGATTCTGCTTTGAAGCAAGCAGCAGAAGCTGAAGATGCAAAGAAGGAAAACATGGAAAGAGCAACTGAGCTTTCTAAAGAAATTTCAACTGTAAAGGAGTCAATTGAACAAGCAAAGCTTGCATCTAACGAAGCACAGCAACAGCAAGCAATGATTTTGGCTGAGAAAGATGTTCTAAGACAATCATATAAGGCTACCCTGGAACAATCTGAAAAGAAATTGCTTGCTTTAAAGAAAGAATTCAGTCCTGAGCTCGCCAAAAATCTTGAAGTGCAGCTGGCTGAGACAGTGAGTGAAATTGGGGCCCTCCAAAAGGAAATGGAAAATAAAAGGACATCGGACTTGGATTCTGTGAAAACTGTTACTTTGGAGCTTGATGATGCTAAGGAGTCGCTGCAGAAAGTAGCAGATGAAGAAAGCTCTCTCAGAAGCTTGGTTGAAACTCTTAAGGCTGAACTAGAGAATGTAAAGAGAGAACATTCTGATTTGAAGGAGAAAGAATCTGAAACTGAATCCATTGTTGGGAATCTGCATGTCAAGCTACGCAAAAGCAAATCTGAGCTTGAAGCCTGCAAGGCAGAAGAATCGAAAGTTAGTGGTGCATCAGATGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGTGAAGCAGAAGATATGAAGAACAAGACAGCAGAATTGAAGATGGAAGCTGAAGTTACCATGCTTGCATTAGCGGATGCAGAGAAAAAGCTTAAAGTGGCACTTGAAGAAGTAGAAGCAGCAAAAGCAGCTGAGGCAAGTGCTCTTGAACAGATTACAGTGTTAACTGAAAGGACTACTGCTGCACGCACGTCAACATCTGAATCCGGTGCTCTGATTACAATTTCAAAGGATGAGTTTGACTCACTAAGCCGAAAAGTTGAGGAGTCTGATAAATTAGCTGACATGAAAATGGCCGCAGCCAAGGCCCAGGTTGAAGCTGTGAAGGCCAGTGAAAACGAGGCTCTGAAAAGGTTAGAAACAACTCAGAAGGAGATTGAGGATATTAAGACTGCAACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCAGCTAAACGGGTGGTGGAGAGTGAGCTTCGAAGGTGGCGTGAGCGAGAGCAGAAGAAGGCAGCAGAAGCCGCATCACGCATATTGGCTGAGACACAGATGTCATCAGAAACATCTCCTCAGCACTATAGGATTCAAAAGCAGAATCCTCCTCATGCAACAGTGGAGGTGAAGAAGTTAGATAAAGAGAAGGTTTCAGTTTCAAAGAAAGCTCTCTTACCTAATATTAGTGGCATCTTCCAAAGGAAGAAAAACCAGGTTGACGGTGGTTCTCCTTCTTATCTTCCAGGTGAGAACCCTGTATGA 1962 0.4322 MVAKIRQNATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPIHKKAKPYSAERVLAKETQLHVAQKELNKLKEQVKNAETTKAQALVELERAKRTVEDLAQKLKVISESRELAINATEAAKSQAKQLKEEKYGDPDGSNGAWKEELEAAVKRYASVMTELDAAKQVLSKTRQECDSSLDARDSALKQAAEAEDAKKENMERATELSKEISTVKESIEQAKLASNEAQQQQAMILAEKDVLRQSYKATLEQSEKKLLALKKEFSPELAKNLEVQLAETVSEIGALQKEMENKRTSDLDSVKTVTLELDDAKESLQKVADEESSLRSLVETLKAELENVKREHSDLKEKESETESIVGNLHVKLRKSKSELEACKAEESKVSGASDEMILTLSQLTSETENARREAEDMKNKTAELKMEAEVTMLALADAEKKLKVALEEVEAAKAAEASALEQITVLTERTTAARTSTSESGALITISKDEFDSLSRKVEESDKLADMKMAAAKAQVEAVKASENEALKRLETTQKEIEDIKTATQEALKKAEMAEAAKRVVESELRRWREREQKKAAEAASRILAETQMSSETSPQHYRIQKQNPPHATVEVKKLDKEKVSVSKKALLPNISGIFQRKKNQVDGGSPSYLPGENPV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1700 653 Coils Coil 274 294 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 630 653 - -
Apr10g1700 653 Coils Coil 150 170 - -
Apr10g1700 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 630 - -
Apr10g1700 653 Coils Coil 188 236 - -
Apr10g1700 653 Coils Coil 510 568 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 181 216 - -
Apr10g1700 653 Coils Coil 397 424 - -
Apr10g1700 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Apr10g1700 653 Coils Coil 248 268 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 178 216 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 583 605 - -
Apr10g1700 653 Coils Coil 306 361 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 583 600 - -
Apr10g1700 653 Coils Coil 61 137 - -
Apr10g1700 653 Coils Coil 432 452 - -
Apr10g1700 653 MobiDBLite consensus disorder prediction 1 27 - -
Apr10g1700 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1700 Apr-Chr10 29874734 29880002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1700 - - gmx:100794569 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1700 10 29874734 29880002 Apr9g1846 9 27227894 27231343 PCT