Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1831 ATGAAAATCACGATGAGAGGACGCTTCCTTGTGACTCCAACACCCAAACACTTGCCCCTCTTCTTCGTTAGTCGCCACATAACACGCGCCACCAAATCTATAACTTCCAATTGCCAAACCCATCATCATCTCACTTTCTCTGTTCCTCTTCCCTTTTTCCCCATTAACAAACACACCCTCCACACTGGTTCCACTGTAGAGCAACAAGTTGAAGCATACGAGGTTGAACCCGATCTCTGGTCGAAGATTCTAGAAGAAGCAAGAAACGATGTCGCTGAAGAACCCATTTTGTGTAGTTACTACAACACCTCCATTTTGTCTCATAAATCGTTGGAAACTGCACTGGGTCATCACCTAGCTACCAAACTGAGCAGTGCAAGCCTTCCAAGTTGTGTCCTTTCTGATCTTTTCTTGAAAGTTCTTGAAGCTAATGAAACCCTCATGGATGCTACGAAGGATGATCTTAGAGCAGTGAAGGAAAGGGACCCTGCTTGCATTAGCCACGTGCACTGTTTCTTGAACTTCAAAGGGTTTTTGGCGTGTCAAGCTCATAGGGTGGCTCATAAATTGTGGCTTCAGGGTAGGAAGGTTCTGGCTGTGATGATTCAGAACCGTGTTTCTGAGGTTTTTGCAGTGGATATTCATCCTGGAGCTAAGGTTGGAAGTGGGATTTTGCTGGATCATGCAACTGGGATTGTTGTGGGTGAAACGGCTGTGATTGGGAACAATGTGTCAATTTTGCATAGTGTGACTTTGGGAGGGACTGGTAAGGTTTCTGGGGATAGGCACCCCAAGATTGGTGATGGGGTGCTTATTGGTGCAGGAACTTGTATCTTGGGGAATATTAAGATTGGTGAAGGAGCTAAAATTGGTGCTGGTTCAGTGGTGATTAAGGATGTGCCTGCAAGGACTACTGTTGTTGGGAACCCTGCTAAGTTGGTGGGAGGGAAGAACAACCCTGTTAAGTTGGACAAGATTCCTAGCTTCACTATGGACCATACTTCACATATTTCTGAGTTTTATGATTATTGTATTTAG 1038 0.4499 MKITMRGRFLVTPTPKHLPLFFVSRHITRATKSITSNCQTHHHLTFSVPLPFFPINKHTLHTGSTVEQQVEAYEVEPDLWSKILEEARNDVAEEPILCSYYNTSILSHKSLETALGHHLATKLSSASLPSCVLSDLFLKVLEANETLMDATKDDLRAVKERDPACISHVHCFLNFKGFLACQAHRVAHKLWLQGRKVLAVMIQNRVSEVFAVDIHPGAKVGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKIGEGAKIGAGSVVIKDVPARTTVVGNPAKLVGGKNNPVKLDKIPSFTMDHTSHISEFYDYCI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1831 345 SUPERFAMILY Trimeric LpxA-like enzymes 80 315 IPR011004 -
Apr9g1831 345 Gene3D Hexapeptide repeat proteins 213 333 - -
Apr9g1831 345 PANTHER SERINE O-ACETYLTRANSFERASE-RELATED 54 345 - -
Apr9g1831 345 SMART SATase_N_2_a 79 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr9g1831 345 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 272 300 IPR018357 GO:0016740
Apr9g1831 345 Pfam Bacterial transferase hexapeptide (six repeats) 263 297 IPR001451 -
Apr9g1831 345 Gene3D serine acetyltransferase, domain 1 61 212 IPR042122 -
Apr9g1831 345 Pfam Serine acetyltransferase, N-terminal 79 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr9g1831 345 CDD LbH_SAT 210 310 IPR045304 -
Apr9g1831 345 PANTHER SERINE ACETYLTRANSFERASE 54 345 - -
Apr9g1831 345 TIGRFAM cysE: serine O-acetyltransferase 152 312 IPR005881 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1831 Apr-Chr9 27108261 27109739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1831 79 341 Miscellaneous Gene Families AT2G17640 52.852 1.90e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1831 K00640 - gmx:100820316 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1831 9 27108261 27109739 Apr9g1831 9 27108261 27109739 ECH
Apr2g0285 2 3440071 3441501 Apr9g1831 9 27108261 27109739 PCT