Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0285 ATGAATGTTCTGGCTCTAAGGCGCTTCCTTTGTTCCCCTTTATATAAGACTTCCCCTTTCACTCCAACGCCAAATCAATTCACACCCATTTTTCCTCGTCGCCCAAAGTTCACATCTTTGCACGCAATTCACCCTATCTCTCTCTTCTCTTCCCCCATGGCTACTTGTGTTGATGCTTCAACCCCTCTTTCTCGGAAGCCAAACGGGTCCCAACCTGATGATCATTCCTTTAACTATGTAAAATTTTGCAGACCCAGTTTCTCTGATCGTGTTTCCTGCGTGCCCATTTGCAAGAATCGTGACAAGCCCTTGCACACACATGTGGAGGAGTTGGAACTTGATGAGGTTGAGGTTGATCTGTGGTTGAAGATTCAGGATGAGGCAAGGTTAGATGTAGATCAAGAACCCATTTTGTCTAGCTACTATTTAAGCTCTATCTTGTCTCATAAATCGTTGGAAAGTGCCTTGGCCAATCACCTCTCTATCAATTTGAGCAATATGAGCCTTCCTAGTAGTACCCTTTTTGATATTTTCATAAGTGTTTTGATGGATGATGAAAATATCATAGGTGCTGTGAAAGATGATTTGAGAGCAGTGAAGGAGAGGGACCCGGCTTGCATAAGTTATGTGCATTGTTTGTTGAATTTCAAAGGTTTTCTGGCATGCCAAGCTCATAGGATTGCTCACAAATTGTGGTTACAAGGGAGGAAGGTTTTAGCACTCTTGATCCAGAATAGGGTATCGGAGGTTTTTGCTGTGGATATTCACCCTGGAGCCAAGATTGGACATGGATTTTTGCTTGATCATGCAACTGGACTTGTGGTGGGAGAGACTGCAATTATAGGAAATAATGTTTCAATTTTGCATAATGTGACATTGGGAGGGACTGGCAAGGCATCTGGGGATAGACATCCAAAAATTGGGGATGGAGTGTTGATAGGTGCAGGGACTTGTATTTTGGGAAATATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGGTTCTGTGGTTTTGAAAGAAGTGCCACCAAGAACTACTGCTGTTGGGAACCCAGCCAGGTTGGTAGGAGGAAAAGATAACCCCATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATATATTTCTGAGTGGTCTGATTATGTTATATAG 1161 0.4272 MNVLALRRFLCSPLYKTSPFTPTPNQFTPIFPRRPKFTSLHAIHPISLFSSPMATCVDASTPLSRKPNGSQPDDHSFNYVKFCRPSFSDRVSCVPICKNRDKPLHTHVEELELDEVEVDLWLKIQDEARLDVDQEPILSSYYLSSILSHKSLESALANHLSINLSNMSLPSSTLFDIFISVLMDDENIIGAVKDDLRAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGHGFLLDHATGLVVGETAIIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKEVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSYISEWSDYVI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0285 386 Pfam Serine acetyltransferase, N-terminal 120 224 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr2g0285 386 Pfam Bacterial transferase hexapeptide (six repeats) 304 338 IPR001451 -
Apr2g0285 386 PANTHER SERINE ACETYLTRANSFERASE 53 386 - -
Apr2g0285 386 CDD LbH_SAT 251 351 IPR045304 -
Apr2g0285 386 PANTHER SERINE ACETYLTRANSFERASE 53 386 - -
Apr2g0285 386 SMART SATase_N_2_a 120 224 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr2g0285 386 Gene3D Hexapeptide repeat proteins 254 375 - -
Apr2g0285 386 SUPERFAMILY Trimeric LpxA-like enzymes 119 356 IPR011004 -
Apr2g0285 386 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 313 341 IPR018357 GO:0016740
Apr2g0285 386 TIGRFAM cysE: serine O-acetyltransferase 192 353 IPR005881 GO:0005737|GO:0006535|GO:0009001
Apr2g0285 386 Gene3D serine acetyltransferase, domain 1 105 253 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0285 Apr-Chr2 3440071 3441501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0285 106 374 Miscellaneous Gene Families AT2G17640 52.574 1.31e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0285 K00640 - gmx:100779106 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0285 2 3440071 3441501 Apr2g0285 2 3440071 3441501 ECH
Apr2g0285 2 3440071 3441501 Apr9g1831 9 27108261 27109739 PCT