Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1809 ATGGAATCCCCACAATCTGTTGTGTCACCATTCAAGAGCACTGTCTTTGGTGAAGGCGAGAAGTATAAGTCTGATGTTTTCACACGAAGCTCGGGTTCCTTGTCTAAAGACATTGAAGCCAATGGAAATAAAGCTGCGGTGTCCAATCCAGAGGAATTCATTGGTGCTGTTGATGTTTACATACATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAAATTTGCTTGACTAATAATCCTGACAATACTGTCTCTACCAAGATTATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGAATCTTCGTCTAAGTGTTAAGACCGTTGAATCTTCTGTTAAATGTGAGATTTGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTACTGGTGAAGGATGGCAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCCCCAGCAGGTTTTGTTCACTTGTCTCTTTCTTACACCGGTGCTTCTCCCGATGTTATGGCAATTTCTGCAATGCCTACTGAGTTGGCTACCAATGGCACCGAGAAGGACTCTGAATCATGCGAGTCACTGGTCAGAGATTTAGACAAAATTGAATTCCCGGATCCAAAAATTGTAAATGAAGACCACTTGATGGTTTCAGAATATTTTGGCATTCCATGTGATGAGAGCGATAGCTTGGCCACTACTGATACTGAAAATCTTAGTTCTGAAGCTGGTGTTCAACTTGTGGAAAGCTTCTCAGCATGCAGTGTTGAATCTGTCCAACCTCCTAAGGCTGATTCTCCACCCAGCAGTGTGTCAACAAATGGAGTTTCATCTCCTTCAGTGGCTGCAAGCTCAGAGTCACCTGATGCTACTGCTTCCAAGTCTACCAATCAGGAACAAGTTTCAGGCACCAAAGCGAAAAGTGGTGATGTCAAAGATGGTGAGAGTGATTCCTCAAATGGGGTGCTGAATGATTCATTTCCAAAGCCAGTTGTGACTGTGAACATTGAGTCTGAGCCAAATGTGGTGCAACAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCATTAGCAAAAATGAAGCTTCCTATGGATTTTGAAAGCGGACCAACTAGTTCAGGAAACTCAAGCTCTGAACAGAAACTACAGACATCAAAGAGCACTAACTCCCGTGTGTTCTATGGGAGCAGAGCTTTCTTCTGA 1275 0.4259 MESPQSVVSPFKSTVFGEGEKYKSDVFTRSSGSLSKDIEANGNKAAVSNPEEFIGAVDVYIHQARDIHNICIYHKQDVYAKICLTNNPDNTVSTKIINGGGRNPVFNENLRLSVKTVESSVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKDGKLEKEFSLSSTDLFHSPAGFVHLSLSYTGASPDVMAISAMPTELATNGTEKDSESCESLVRDLDKIEFPDPKIVNEDHLMVSEYFGIPCDESDSLATTDTENLSSEAGVQLVESFSACSVESVQPPKADSPPSSVSTNGVSSPSVAASSESPDATASKSTNQEQVSGTKAKSGDVKDGESDSSNGVLNDSFPKPVVTVNIESEPNVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKLQTSKSTNSRVFYGSRAFF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1809 424 MobiDBLite consensus disorder prediction 277 347 - -
Apr9g1809 424 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Apr9g1809 424 SMART C2_3c 56 159 IPR000008 -
Apr9g1809 424 MobiDBLite consensus disorder prediction 392 413 - -
Apr9g1809 424 MobiDBLite consensus disorder prediction 277 324 - -
Apr9g1809 424 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 424 - -
Apr9g1809 424 Pfam C2 domain 56 161 IPR000008 -
Apr9g1809 424 Gene3D C2 domain 52 208 IPR035892 -
Apr9g1809 424 PANTHER EXPRESSED PROTEIN 1 424 - -
Apr9g1809 424 CDD C2 57 163 - -
Apr9g1809 424 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 185 IPR035892 -
Apr9g1809 424 MobiDBLite consensus disorder prediction 388 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1809 Apr-Chr9 26979593 26982321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1809 - - gmx:100781587 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1809 9 26979593 26982321 Apr9g1809 9 26979593 26982321 ECH
Apr2g0265 2 3232354 3235487 Apr9g1809 9 26979593 26982321 PCT