Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0265 ATGGATTCCCCACAATCTGTAGTGTCACCCTTCAGAAGCTCGGTCTTGGGTGAGGGTGAGAAGCACAAATCTGATGTGTACACAGGAAATTCCAGTCCCTTGTCCAAGGACATTGAAGTTAATGGGAAAGAAGCTGTTATGTCAAATGTTGAAGAGTTCCTTGGAGTGCTTGATGTTTTCATTCATCAGGCTAGGGACATTCAAAACATTTGTATATACCACAAGCAAGATGTTTATGCTAAGATTTGCCTAACAAGTAACCCCGAGACTACTGTGGCTACCAAGACTATCAATGGAGGAGGAAGAAACCCTGTGTTTAATGAGAACCTTCGCGTGAATGTTAGGACTGTTGATGCTTCTCTCAAGTGTGAGATATGGATGCTGAGTAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTACCTTTGTCTGAAGTACTAGTCCAGAATGGGAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTGCAGGTTTTGTTCAGTTGTCCCTTTCTTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTGCAATGCCAACCAAGGTGGCTACAGATGCCACTGTGCAAGACTCGGAAACTTCTGAGTCATTGGCAAGGGATTTGGATAAGATTGAGTTCCCTGATCCTAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATACTTTGGCATTCCATGTGAAGAGACTCAGTGTTCTGATAGCTTGGCAACTTCTGATGCCGAAAATCATAGTTCTGAAGCCGGTGTTCGTCTTGTGGAAAGCTTCTCGGCATGCAGTGTTGAGTCTGTTCAGCCCCCTAAGGTTGATTCTCCACCTAGCAGTGTGTCAACAAATGGAGTTTCTTCTCCTTCTATGCCTGCAAGCTCAGAATCATCTGATGCTGCTGCTGCTGCTGATACTTCTAAGTCTCCTAATCAGGAACAAGTTTCAGGCACCAAAGAGGAAAAAAATGTGGATGTGAAAGATGGTGAGAGTGATTCCTCAAGTGGTGTTCCAAGTGACTCATTCCCTAAGCCTGTTGTGACTGTGAACATTGAGCCAGAACCAAAGGTGGTGCAGCAAGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTTACTGAGTCTTTAGCAAAAATGAAGCTTCCTATGGACATTGAAAGTGAACCTACTAGTTCAGGAAATTCAACCACTGAGCAGAAACTACAGCCATCGAAGAACAATAACTCCCGTGTGTTTTATGGCAGCAGAGCTTTCTTCTGA 1299 0.4326 MDSPQSVVSPFRSSVLGEGEKHKSDVYTGNSSPLSKDIEVNGKEAVMSNVEEFLGVLDVFIHQARDIQNICIYHKQDVYAKICLTSNPETTVATKTINGGGRNPVFNENLRVNVRTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPAGFVQLSLSYTGASPDVMAISAMPTKVATDATVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLATSDAENHSSEAGVRLVESFSACSVESVQPPKVDSPPSSVSTNGVSSPSMPASSESSDAAAAADTSKSPNQEQVSGTKEEKNVDVKDGESDSSSGVPSDSFPKPVVTVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDIESEPTSSGNSTTEQKLQPSKNNNSRVFYGSRAFF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0265 432 MobiDBLite consensus disorder prediction 1 30 - -
Apr2g0265 432 MobiDBLite consensus disorder prediction 280 366 - -
Apr2g0265 432 MobiDBLite consensus disorder prediction 280 329 - -
Apr2g0265 432 CDD C2 57 163 - -
Apr2g0265 432 MobiDBLite consensus disorder prediction 400 426 - -
Apr2g0265 432 Pfam C2 domain 55 162 IPR000008 -
Apr2g0265 432 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Apr2g0265 432 SMART C2_3c 56 159 IPR000008 -
Apr2g0265 432 Gene3D C2 domain 51 213 IPR035892 -
Apr2g0265 432 PANTHER EXPRESSED PROTEIN 1 432 - -
Apr2g0265 432 ProSiteProfiles C2 domain profile. 42 161 IPR000008 -
Apr2g0265 432 MobiDBLite consensus disorder prediction 396 432 - -
Apr2g0265 432 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0265 Apr-Chr2 3232354 3235487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0265 - - gmx:100804602 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0265 2 3232354 3235487 Apr2g0265 2 3232354 3235487 ECH
Apr2g0265 2 3232354 3235487 Apr9g1809 9 26979593 26982321 PCT