Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1750 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGTCCATCCAAGGCAGATCTAGCTCGCCGCTCCGGCGATTCTCCGGCGACGGCGCAATCTGACCTCCGACGGAGCCGCCGCCGCCGAAATGTGAGGTACAACATAGACTACGACGACTACCTGGACGAGGAAGACGAGGATGAAGAGGAGGATGAGAGGAGGCGCGAGAAAAAAAAGCTGAAGCTCGTTGTGAAGCTGAACAACAACGAAGAGGAAGACGAGGACGAAGAGGACTCCGCGCCGAGTCGCAGAGGCTCGCGTGGTTCACACGCGCGGGAGGAGGAGAAAGCAAAGGAGGGGGAAGACGATGAAGACGAAGAAGAAGGAGAAGAGGAAGAAGAAGAAGGGAATGAGGATGCAGAGGAGCATGAAGAGGTAAAGGCCAGAAAAGTGGATTCCAAAGGGCTCCACTCTGTTTCAGGAACTCCATCAAAGCTTCCACCTGGGATTCCGTTGCCCGACAAGAGGACCCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACTTATGGTGTGTATGCAGAGCCGGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCGATGGACTTCTCCACAGTGAGGAAGAAGTTGGCAAATGGATCTTATCATACCTTGGAACAATTTGAGAGTGATGTATTTTTGATTTGCTCAAATGCAATGCAATACAATGCAGCGGAGACTATATACCACAAACAGGCAAGATCAATACAAGAACTGGCAAGGAAAAAGTTTGAGAAGTTGAGGATTGATTTTGAACGTTCTCAGAGTGAGCTGAAGTCTGAACAAAAAACAAGATCTAATCCCTTGGTTAAGAAGCTAGCAAAGAAGCCACTGGGTCACACTTCACAGGAACCTGTTGGCTCTGATTTCTCCTCGGGTGCAACTCTTGCTACTATTGGAGATGTACTGCCAACCTCCCATCCAATGCAAGGTGTCATCTGTGAAAGGCCTGGCAACATTGATGGCCTTACGGAGGGGAATGCTTTCTTGATGGATGCAAATCAAGAGAAAGCAGAAGACTATTTATCTGGGAAGGGTATGCTCTCCAAGCTGGGAAGGAAATCATCTGTGCAAGACATTGAACGTCGTGCAACTTATAATATGTCTAATCTACCAATTACTAGATCTGATTCCATATTTTCAACATTTGAGAGTGAAATTAAGCAACTAGTCACTGTTGGACTACAAGCTGAGTATTCCTATGCTAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACTGCTTGGAAAATTGCTTCCCGGAGGATTCAGCAAGCACTGCCACCTGGCTGTAAATTTGGTCGTGGTTGGGTTGGAGAATATGAACCGCTTCCAACCCCTGTATTGATGCTTGATAATCGTGTCCAGAAACAACAACCTAATATGGTGACTAAGTTGCAGCCTACTACTGAATCAATAAAGGTTGACAAAAATTTAAAGAATATGGAATCCACCATGGAACCTGTTAATGGACCAATTTTTGAGGGAAAACAGCCTTCAGTTTCTCCTTGTAGTGGGATTACGTCAGAAGGAAGGTCATCTTTTTTTGGTTCTGCTGGACCAAGACCCAATGCTCATATCAATCTCTTTTATCAGCAATCCAATGCCCAAACCAGGAACCTCAGTAAATCTGAGAATAAGGGTTTGAAGCAGGTGGAGTTGAACTCTCCACCCTCGGGTGATCAGAATAATGCCAGTCTAGTTGCAAAGCTTACAAGCAATACTCCGGCAGCAGTGTCTAAGCCCAGAGAGATGGCACCCAATAACATGAATATTTTACCATCTATCCCTTTCAAGCAGCCAGATGCTAATGGAGTTGTTAGTGGAGAGTTGCCTAATGGGAAAGTAAGGAATGCTAGTTTAAATAGACGGATGACTGGTCCATCATCTGAAAATACATCAAATCAGACAGGCAGAGCAGCTCCCTTTGTTGCCCATGGGCAAGAGCAGAATCTTAATGACCCAGTTCAGTTGATGAGGATGTTAGCCGAAAAGGCACAAAAGCAACAGACTACCAGTTCATCCAATCATTCCCCTGCTGACACACCACCAGTGACACCATCAGGACGGAGAGAAGACTCAAGCAATGCTTCCGCAGCAGCTGCCCGTGCGTGGATGTCGGTAGGAGCAGCAGGTTTTAAACAAGGACCTGATAATTCTAGTTCACCCAAGAACCAGATTTCTGCAGATTCCTTGTACAACCCAGCGCGAGAGTTCCATCAACATATTTCACGAGTTAGGGGAGAGTTTTCTTCTGGTGGAATGCCTTTCCAGTCTGAGAAGAACAATTTTCCATTTCAGGCTCTTGTACCCCAACCTATTCACCCAGTTGGCGTTTCACAATTTCCAAACCGACCTATGGTTTTCTCACAAGTGGCAGCTTCTGACTTATCAAGATTTCAAATGCTGCCTTGGCGTGGTATCCGTCCTCAGAGTCAACCAAGACAGAAACAGGAAACACTTCCTCCCGACTTGAATATCGGTTTCCAGTCTCCTGGGTCGCCTGCAAAACAATCTTCTGGGGTGCTGGTTGACTCTCAGCAACCAGACCTGGCATTGCAGCTATGA 2622 0.4664 MGQIVRRKKKGRPSKADLARRSGDSPATAQSDLRRSRRRRNVRYNIDYDDYLDEEDEDEEEDERRREKKKLKLVVKLNNNEEEDEDEEDSAPSRRGSRGSHAREEEKAKEGEDDEDEEEGEEEEEEGNEDAEEHEEVKARKVDSKGLHSVSGTPSKLPPGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFSTVRKKLANGSYHTLEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRIDFERSQSELKSEQKTRSNPLVKKLAKKPLGHTSQEPVGSDFSSGATLATIGDVLPTSHPMQGVICERPGNIDGLTEGNAFLMDANQEKAEDYLSGKGMLSKLGRKSSVQDIERRATYNMSNLPITRSDSIFSTFESEIKQLVTVGLQAEYSYARSLARFAATLGPTAWKIASRRIQQALPPGCKFGRGWVGEYEPLPTPVLMLDNRVQKQQPNMVTKLQPTTESIKVDKNLKNMESTMEPVNGPIFEGKQPSVSPCSGITSEGRSSFFGSAGPRPNAHINLFYQQSNAQTRNLSKSENKGLKQVELNSPPSGDQNNASLVAKLTSNTPAAVSKPREMAPNNMNILPSIPFKQPDANGVVSGELPNGKVRNASLNRRMTGPSSENTSNQTGRAAPFVAHGQEQNLNDPVQLMRMLAEKAQKQQTTSSSNHSPADTPPVTPSGRREDSSNASAAAARAWMSVGAAGFKQGPDNSSSPKNQISADSLYNPAREFHQHISRVRGEFSSGGMPFQSEKNNFPFQALVPQPIHPVGVSQFPNRPMVFSQVAASDLSRFQMLPWRGIRPQSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVLVDSQQPDLALQL* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1750 873 ProSitePatterns Bromodomain signature. 183 239 IPR018359 -
Apr9g1750 873 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 873 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 62 79 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 1 15 - -
Apr9g1750 873 Coils Coil 52 72 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 272 309 - -
Apr9g1750 873 Pfam Bromodomain 171 251 IPR001487 GO:0005515
Apr9g1750 873 MobiDBLite consensus disorder prediction 829 873 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 90 108 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 637 656 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 682 719 - -
Apr9g1750 873 Gene3D - 99 285 IPR036427 GO:0005515
Apr9g1750 873 SMART bromo_6 158 266 IPR001487 GO:0005515
Apr9g1750 873 SUPERFAMILY Bromodomain 151 264 IPR036427 GO:0005515
Apr9g1750 873 MobiDBLite consensus disorder prediction 824 873 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 1 164 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 109 132 - -
Apr9g1750 873 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 873 - -
Apr9g1750 873 PRINTS Bromodomain signature 194 210 IPR001487 GO:0005515
Apr9g1750 873 PRINTS Bromodomain signature 210 228 IPR001487 GO:0005515
Apr9g1750 873 PRINTS Bromodomain signature 228 247 IPR001487 GO:0005515
Apr9g1750 873 ProSiteProfiles Bromodomain profile. 177 247 IPR001487 GO:0005515
Apr9g1750 873 MobiDBLite consensus disorder prediction 682 713 - -
Apr9g1750 873 Coils Coil 101 121 - -
Apr9g1750 873 MobiDBLite consensus disorder prediction 621 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1750 Apr-Chr9 26569385 26575658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1750 K22184 - gmx:100799986 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1750 9 26569385 26575658 Apr9g1750 9 26569385 26575658 ECH
Apr2g0190 2 2533873 2540221 Apr9g1750 9 26569385 26575658 PCT