Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0190 ATGGTTCAGATCGCGAAGAGGAAGAAGGGACGGCCGTCGAAGGCGGATCTGGCACGCCGCGCCGGCGAGTCTCCGGCGACTGCATCGCAGCCCGATCTCCGCCGAAGCCTCCGCCGCCGGAGCGTGAGGTACAACATCATCGACTACGACGACGATTACCTCGACGACGAGGAGGATGAGAGGAAACGCGAGAAGAAGAAGCTCAAGTTGATGGCGAAGCTGAACCAGGGCGAAGAAGAAGAGGAGCGAGAAGAAAACGAGTCGGCACCGAGTCGCACTCGCGCCGAGTCGCGTGCGGACCACGCGCCACTAGAAGAAGAAGACGACGACGATGAAAATGAACAAGAGGAAGATAATGAAGACGCCGAAGAAGAGCACGAAGAAGACGAAGACGTAAAGGGCAGAAAAGTGGATTCGGAAGGGCTCCACTCTGTTTCTGTTTCGGTTTCAGGAATTCCTGCGATTCCGCAATCTGGGATTCCGTTGCCTGATAAGAGGACTCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACGTATGGTGTGTTTGCAGAGCCTGTTGATCCGGAAGAGCTTCCTGATTATCATGATGTGATCGAGCATCCCATGGACTTTGCCACCGTGAGGAGGAAGTTGGCAAATGGATCTTATCCTACCTTAGAACAATTTGAGAGTGATGTATTTTTAATTTGCTCAAATGCAATGCAGTACAATGCACCAGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTTGGGCGGAAAAAGTTTGACAAGTTAAGGATTGAATTTGATCCCTCTCAGATTGAGCTGAAATCCGAACAAAAACCACGATCTAATTCTTTGGTTAAGAAGCAAGCAAGGAAGCCACTGGCACTGGCACGTGCCTCACATGAACCTGTTGGCTCCGATTTCTCATCAGGGGCAACTCTTGCTACTATTGGAGATGTACAGCCGACTTCTCATCCAATGCAAGGTGGTAGCTATGAGAGACCTGGAAACATTGATGGTATTTTGGAGGGAAATCCTTTCTGGATTGATGGAAATCAAGAGAAAGCTGAAGATGTTTTGTCAGGTAAGGGTCTGCCCTCTAAGTGGGGAAGGAAGTCATTTGTGCTTGATGAAAGTCGTCGTGCTTCTTACAATATGTCTAATCAACCATTTGCTAGATCGGATTCAATATTTATGACTTTTGAGAGTGAAATGAAGCATCTGGTGACTGTTGGACTTCATGCAGAACATTCCTATGCTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCTATTGCTTGGAAAATTGCTTCCCACAGGATTCAGCACGCACTGCCAGCTGGCTGTAAATATGGTCGTGGTTGGGTTGGAGAGTATGAACCGCTTCCAACCCCAATATTAATGCTTGATAATAGTGTCCTAAAAGAAACCAGTTTGGTTCCAAAATTGCATTCTGGTACTAAATTACAAATTGACAAAAATTGTAATAATGTGGAACCCAGCATTAAACATACTGATAAAGGACAGATGCTTGAGGGCAAACAATCTTCGATTTGTCCTGCCACTGGGCCTGATTCCAAAGGAAAACCTTTGGTTGGTTCTGCTCGAGTAAGCCCTAATGCTCTTGTCAACATCCCAAATCAGAAGCACAATGTCCAGTCCAGGAATTTACGCAAGACTGAGAATGGGGCTTTGAAACAAGTGGAGTTGAATTCCTTACCCTCAAGTAATCAGAATAACACTCTGATTTCAAACTTTACAAATAATGCTCCTACAACGAATTCTCCTTCAGCAGAGTCTAGGCCCAGAGAGATGGTGCCAAGGAACATGAATACTTTGCCATCTACACCTTTCAAGCAGCCAGATACTAATGTAGTTGGCAGTGGAGAGTTTCCTAATGGAAAGGTCCCAAATACAAATTTGAATAGACAGGTGAATGGTCCATCATCTGAAAGTACATCAACCCAAATAAGCAGAGCAGCTCCTTTTGTTGCTCATGGGCAGGGGCAGGGTCTTAGTGACCCAGTTCAGTCAATGAGAATGTTTGCTGAAAAGGCTCAAAAGCAACAGTCTTCTTCTGATCATTCCCTAGTTGATAGTCTGCCAGTGACACCATCAGGTCCATCTGAACAGAGAGATGACTCCGGCAATGCTTCAGCAGCAGCTGCCCGTGCATGGATGTCTGTAGGTGCTGGAGGGTTGAAACAAGGATCTGACAGTTCTAGTTCACCCAAAAATCAGATTTCTGCAGATTCTTTGTACAACCCAACAAGAGATTTCCATCCACACATTACACGAATTCGGGGGGAGTTTCCTTCTGCTGCAATGTCTTTCCAGCCATTTCCAGCACTTGTCCCTCAACCTATTCACACAGGCCCTCTTTCACAGTTTCCCAACCGGCATATGGTTTGCCCTCAATTAGCATCTGCTGACCAATCTAGAATTCAAATGCAGTCCCCTTGGCGAGGTCTTAGTCCTCGTGGTCAATCAAGGCAGAAACAGGAAACCCTTCCGCCTGACTTGAATATTGGTTTTCAATCTCCAGGGTCACCTGCGAAACAATCATCTGGTGTCCTTGTTGACTCACAACAACCAGACCTAGCTTTGCAACTATGA 2619 0.4635 MVQIAKRKKGRPSKADLARRAGESPATASQPDLRRSLRRRSVRYNIIDYDDDYLDDEEDERKREKKKLKLMAKLNQGEEEEEREENESAPSRTRAESRADHAPLEEEDDDDENEQEEDNEDAEEEHEEDEDVKGRKVDSEGLHSVSVSVSGIPAIPQSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFATVRRKLANGSYPTLEQFESDVFLICSNAMQYNAPETIYHKQARSIQELGRKKFDKLRIEFDPSQIELKSEQKPRSNSLVKKQARKPLALARASHEPVGSDFSSGATLATIGDVQPTSHPMQGGSYERPGNIDGILEGNPFWIDGNQEKAEDVLSGKGLPSKWGRKSFVLDESRRASYNMSNQPFARSDSIFMTFESEMKHLVTVGLHAEHSYARSLARFSASLGPIAWKIASHRIQHALPAGCKYGRGWVGEYEPLPTPILMLDNSVLKETSLVPKLHSGTKLQIDKNCNNVEPSIKHTDKGQMLEGKQSSICPATGPDSKGKPLVGSARVSPNALVNIPNQKHNVQSRNLRKTENGALKQVELNSLPSSNQNNTLISNFTNNAPTTNSPSAESRPREMVPRNMNTLPSTPFKQPDTNVVGSGEFPNGKVPNTNLNRQVNGPSSESTSTQISRAAPFVAHGQGQGLSDPVQSMRMFAEKAQKQQSSSDHSLVDSLPVTPSGPSEQRDDSGNASAAAARAWMSVGAGGLKQGSDSSSSPKNQISADSLYNPTRDFHPHITRIRGEFPSAAMSFQPFPALVPQPIHTGPLSQFPNRHMVCPQLASADQSRIQMQSPWRGLSPRGQSRQKQETLPPDLNIGFQSPGSPAKQSSGVLVDSQQPDLALQL* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0190 872 MobiDBLite consensus disorder prediction 103 128 - -
Apr2g0190 872 Coils Coil 54 87 - -
Apr2g0190 872 Coils Coil 105 132 - -
Apr2g0190 872 Pfam Bromodomain 170 250 IPR001487 GO:0005515
Apr2g0190 872 MobiDBLite consensus disorder prediction 610 657 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 684 717 - -
Apr2g0190 872 SMART bromo_6 157 265 IPR001487 GO:0005515
Apr2g0190 872 MobiDBLite consensus disorder prediction 810 872 - -
Apr2g0190 872 SUPERFAMILY Bromodomain 160 263 IPR036427 GO:0005515
Apr2g0190 872 MobiDBLite consensus disorder prediction 86 102 - -
Apr2g0190 872 PRINTS Bromodomain signature 179 192 IPR001487 GO:0005515
Apr2g0190 872 PRINTS Bromodomain signature 193 209 IPR001487 GO:0005515
Apr2g0190 872 PRINTS Bromodomain signature 209 227 IPR001487 GO:0005515
Apr2g0190 872 PRINTS Bromodomain signature 227 246 IPR001487 GO:0005515
Apr2g0190 872 MobiDBLite consensus disorder prediction 684 761 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 317 336 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 33 49 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 585 657 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 1 140 - -
Apr2g0190 872 ProSitePatterns Bromodomain signature. 182 238 IPR018359 -
Apr2g0190 872 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 872 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 735 755 - -
Apr2g0190 872 ProSiteProfiles Bromodomain profile. 176 246 IPR001487 GO:0005515
Apr2g0190 872 Gene3D - 163 283 IPR036427 GO:0005515
Apr2g0190 872 MobiDBLite consensus disorder prediction 58 79 - -
Apr2g0190 872 MobiDBLite consensus disorder prediction 585 601 - -
Apr2g0190 872 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 872 - -
Apr2g0190 872 CDD Bromodomain 164 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0190 Apr-Chr2 2533873 2540221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0190 K22184 - gmx:100792844 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0190 2 2533873 2540221 Apr2g0190 2 2533873 2540221 ECH
Apr2g0190 2 2533873 2540221 Apr9g1750 9 26569385 26575658 PCT