Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1461 ATGGAAGCTCTCAAGACCCTTTTCTTAGCCTTTTTTCTTCTCTTAGCTTCAGCATTGTCTTTAGCCAATGCCGAAGCCTTGTCTTCAGCCAATGCCAAAATCCAGGAGCACGAGTTTGTTATTCAAGCAACTCCAGTGAAGAGGCTGTGCAACACTCATAGCACCCTCACAGTGAATGGACAGTTCCCGGGCCCAACCTTGGAAGTCAACAATGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGTTACAATGTGACCATTCACTGGCACGGTATTCGGCAAATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAGTGTCCCATTCGCCCTGGTGAAAGCTACACTTACCGATTTACAATTCAAGGACAAGAAGGCACACTTTGGTGGCACGCTCACAGCTCATGGGTAAGAGCCACTGTTTATGGAGCTTTGATCATTCACCCTAGGGAAGGAGAGTCCTATCCTTTCCCTAAGCCAAAGCGCGAGACACCAATTATGCTAGGGGAATGGTGGGATGCAAACCCACTCGATGTTGTGAGACAGGCCACACAAACAGGAGCAGCGCCTAATATATCCGATGCATACACTATCAATGGTCAACCTGGCGATCTATACAAGTGCTCAAGCCAAGGCACCACCATAGTTCCAATAGATTCTGGCGAGACCAACCTCCTCCGTGTCATCAATGCTGCACTCAACCAACCCCTTTTCTTCACTATTGCCAACCACAAGTTCACAGTGGTTGGTGCTGATGCCGCCTACCTCAAGCCTTTCACCACCACAGTCATCGTGCTAGGACCTGGCCAAACCACTGATGTTCTCATCAATGGTGACCAACCACCCTCACGTTACTACATGGCAGCACGTGCTTACCAATCTGCTCAAAATGCTCCCTTTGACAACACCACCACCACAGCCATTCTTGAATACAAATCAGCCCCTTGTCCTGCAAAGGGTGTTGCAATCAAACCAGTTATGCCTTCTCTCCCAGCTTACAATGACACAAACACTGTCACTTCCTTTAGTACAAGCTTAAGAAGTCCAAGGAAAGTTGAGGTTCCCACTGAAATTGATGACAACTTGTTCTTCACCATTGGCCTTGGACTCAACAATTGCCCTCCAAATTTCAATTCAAACCAATGCCAAGGACCCAACGGGACACGTTTCACTGCAAGCATGAACAATGTGTCATTTACTCTCCCAAACACTGTTTCCATTTTGCAAGCGCATCACCTTGGAGTTCAAGGAGTGTTCACCACTGATTTTCCGTCACAACCTCCGGTGAAATTTGATTACACTGGTAACGTGAGCCGTTCACTTTGGCAACCTGTTCCTGGGACTAAAGTCACCAAGTTGAAGTTCGGATCAAGGGTGCAGATTGTGTTGCAAGATACTAGCATTGTTACCCCTGAGAACCACCCAATTCATCTTCATGGGTATGATTTCTACATTGTGGCAGAAGGGTTTGGAAACTTTGACCCTAAGAAAGACACTTCAAAATTCAACCTTGCTGATCCACCTATGAGGAATACAGTGGCAGTGCCTGTGAATGGATGGGCTGTTATTAGATTTGTTGCAGATAACCCAGGAGCTTGGATTATGCATTGTCACTTGGATGTTCACATCGGGTGGGGTTTGGCCACTGTGCTCTTGGTAGATAATGGAGAAGGCCTATTGCAATCCATAGAACCCCCTCCAGAGGACCTGCCTCTGTGTTAG 1734 0.4717 MEALKTLFLAFFLLLASALSLANAEALSSANAKIQEHEFVIQATPVKRLCNTHSTLTVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWVRATVYGALIIHPREGESYPFPKPKRETPIMLGEWWDANPLDVVRQATQTGAAPNISDAYTINGQPGDLYKCSSQGTTIVPIDSGETNLLRVINAALNQPLFFTIANHKFTVVGADAAYLKPFTTTVIVLGPGQTTDVLINGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSAPCPAKGVAIKPVMPSLPAYNDTNTVTSFSTSLRSPRKVEVPTEIDDNLFFTIGLGLNNCPPNFNSNQCQGPNGTRFTASMNNVSFTLPNTVSILQAHHLGVQGVFTTDFPSQPPVKFDYTGNVSRSLWQPVPGTKVTKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTSKFNLADPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVDNGEGLLQSIEPPPEDLPLC* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1461 577 CDD CuRO_2_LCC_plant 169 315 IPR034285 -
Apr9g1461 577 ProSitePatterns Multicopper oxidases signature 1. 535 555 IPR033138 -
Apr9g1461 577 Gene3D - 380 577 IPR008972 -
Apr9g1461 577 Gene3D - 16 153 IPR008972 -
Apr9g1461 577 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Apr9g1461 577 TIGRFAM laccase: laccase 32 577 IPR017761 GO:0046274|GO:0048046|GO:0052716
Apr9g1461 577 SUPERFAMILY Cupredoxins 359 577 IPR008972 -
Apr9g1461 577 PANTHER MULTI-COPPER OXIDASE 6 577 IPR045087 -
Apr9g1461 577 Pfam Multicopper oxidase 427 560 IPR011706 GO:0005507|GO:0016491
Apr9g1461 577 ProSitePatterns Multicopper oxidases signature 2. 540 551 IPR002355 GO:0005507
Apr9g1461 577 Gene3D - 163 355 IPR008972 -
Apr9g1461 577 SUPERFAMILY Cupredoxins 32 180 IPR008972 -
Apr9g1461 577 PANTHER LACCASE 6 577 - -
Apr9g1461 577 CDD CuRO_3_LCC_plant 422 560 IPR034289 GO:0005507
Apr9g1461 577 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Apr9g1461 577 SUPERFAMILY Cupredoxins 161 353 IPR008972 -
Apr9g1461 577 Pfam Multicopper oxidase 167 317 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1461 Apr-Chr9 24217753 24221375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1461 K05909 - gmx:100796956 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1461 9 24217753 24221375 Apr10g2151 10 34082674 34087485 ECH
Apr9g1461 9 24217753 24221375 Apr9g1461 9 24217753 24221375 ECH
Apr10g2151 10 34082674 34087485 Apr9g1461 9 24217753 24221375 PCT