Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2151 ATGGAGCCTACAAAGACCATTCTCAACAATGCTAAGTACTCCTCCATCTTCCTAGCCATCTTTCTTCTCTTAGCTTCAGCATTGTCTTCAGCAAATGCCAATATTCATAAGCATGAGTTTGTTATTCAAGCAACTCCAGTGAAGAGGCTGTGCAAAACCCACAATACAATCACGGTGAATGGACAATACCCGGGCCCAACGTTGGAAATCAGCAATGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGTTACAACGTGACCATTCATTGGCATGGCATTCGACAAATGAGAACAGGATGGGCAGATGGTCCAGAATTTGTGACACAATGCCCTATTCGTCCTGGAAAAAGTTACACCTACCGATTCACAGTTCAAGGACAAGAAGGCACACTTTGGTGGCACGCTCATAGTTCATGGTTAAGAGCCACAGTTTACGGTGCTTTAATCATTCGTCCCAGAGAAGGAGAAACCTATCCTTTTCCCAAGCCAAAGCGCGAGACACCCATTCTTCTTGGAGAATGGTGGGACGCAAACCCCATCGATGTTGTGAGGCAAGCCACACGATCTGGAGCAGCTCCAAACGTGTCTGATGCATACACTATCAATGGTCAACCTGGTGACCTTTACAAGTGCTCTACCAAAGGCACCACCGTTGTTCCAACACATTCCGGCGAGACCAACCTCTTAAGAGTCATCAACTCCGCACTCAACCAACCTCTCTTCTTCACAATCGCAAAACACAAACTCACAGTGGTCGGTGCCGATGCTTCCTACGTTAAACCCTTTACCACCAAAGTCCTCATGCTGGGTCCCGGCCAAACCACCGACGTCTTAGTCACCGCCGACCAAACACCTTCCCGTTACTACATGGCGGCGCGTGCATACCAATCAGCTCAAAATGCACCGTTTGACAACACCACCACCACCGCCATTCTTCAATACAAATCGCACCATTCCAAAGCGAACCGTTCTAAAGCATTCATGCCCTCTCTCCCTGCTTACAATGACACTAACATCGTCACTGCTTTCAGTAGAAGCTTCCGAAGCCCAAGAAAAGTTGAAGTTCCCACTGAAATTGATGAGAGCTTCTTCTTCACCGTTGGCTTAGGACTCAACAAGTGTCCACCGAACTTCAGTGCAAGGAGATGCCAAGGACCCAATGGAACGAGGTTCACTGCGAGCATGAACAACGTGTCATTTGTTCTTCCCAACAAAGTTTCCATCTTGCAGGCTCATTATCAGGGAATTCCCGGAGTGTTCACCACTGATTTTCCGGCGAAGCCGCCAGTGAAGTTCAATTTCACCGGCAACGTGAGCCGTTCTCTGTGGCAACCTGCTCCCGGGACTAAAGCGCACAAGTTGAAGTTCGGGTCGAGGGTGCAGATCGTTTTGCAGGACACGAGCATTGTCACTCCTGAGAACCACCCTATTCACCTTCATGGCTATGATTTCTACATTGTTGCAGAAGGGTTTGGAAATTTCGACCCTAAGAAGGATAAATCCAAGTTTAACCTTGTTGATCCACCTCTCAGGAACACTGTGGCAGTGCCTGTTAATGGATGGGCTGTTATTCGATTTGTTGCTGATAACCCAGGTGCGTGGCTTATGCATTGTCACTTGGATGTTCACATCACGTGGGGTTTGGCCACGGTGTTATTGGTAGAGAACGGAGTTGGGAAATTGCAATCCATAGAGTCCCCTCCATTGGATCTGCCTCTTTGTTAG 1731 0.4806 MEPTKTILNNAKYSSIFLAIFLLLASALSSANANIHKHEFVIQATPVKRLCKTHNTITVNGQYPGPTLEISNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGKSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPREGETYPFPKPKRETPILLGEWWDANPIDVVRQATRSGAAPNVSDAYTINGQPGDLYKCSTKGTTVVPTHSGETNLLRVINSALNQPLFFTIAKHKLTVVGADASYVKPFTTKVLMLGPGQTTDVLVTADQTPSRYYMAARAYQSAQNAPFDNTTTTAILQYKSHHSKANRSKAFMPSLPAYNDTNIVTAFSRSFRSPRKVEVPTEIDESFFFTVGLGLNKCPPNFSARRCQGPNGTRFTASMNNVSFVLPNKVSILQAHYQGIPGVFTTDFPAKPPVKFNFTGNVSRSLWQPAPGTKAHKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDKSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHITWGLATVLLVENGVGKLQSIESPPLDLPLC* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2151 576 CDD CuRO_3_LCC_plant 421 559 IPR034289 GO:0005507
Apr10g2151 576 Gene3D - 380 576 IPR008972 -
Apr10g2151 576 Gene3D - 23 154 IPR008972 -
Apr10g2151 576 PANTHER MULTI-COPPER OXIDASE 10 576 IPR045087 -
Apr10g2151 576 Pfam Multicopper oxidase 42 156 IPR011707 GO:0005507
Apr10g2151 576 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Apr10g2151 576 PANTHER LACCASE 10 576 - -
Apr10g2151 576 Pfam Multicopper oxidase 168 317 IPR001117 -
Apr10g2151 576 SUPERFAMILY Cupredoxins 357 576 IPR008972 -
Apr10g2151 576 SUPERFAMILY Cupredoxins 33 181 IPR008972 -
Apr10g2151 576 CDD CuRO_1_LCC_plant 38 154 IPR034288 GO:0005507
Apr10g2151 576 ProSitePatterns Multicopper oxidases signature 1. 534 554 IPR033138 -
Apr10g2151 576 TIGRFAM laccase: laccase 33 576 IPR017761 GO:0046274|GO:0048046|GO:0052716
Apr10g2151 576 Gene3D - 166 354 IPR008972 -
Apr10g2151 576 CDD CuRO_2_LCC_plant 170 316 IPR034285 -
Apr10g2151 576 SUPERFAMILY Cupredoxins 162 352 IPR008972 -
Apr10g2151 576 Pfam Multicopper oxidase 426 558 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2151 Apr-Chr10 34082674 34087485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2151 K05909 - gmx:547704 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1461 9 24217753 24221375 Apr10g2151 10 34082674 34087485 ECH
Apr10g2151 10 34082674 34087485 Apr10g2151 10 34082674 34087485 ECH
Apr10g2151 10 34082674 34087485 Apr9g1461 9 24217753 24221375 PCT