Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1457 ATGCAAATGAAGCCACCATTCTCACCCTCTTCGTCCCTCTTCAGAGGCAAGGCTCGCCTCTCTCCCTATCTCTTCACTCTCATTGCTTTCGTCCTCTTCGTCGCTATCCTCTATGGCGAGGACTTCATGTGCATCTTCGGCCAACAGTTCCAAAACTACTCTTACCCTGACAAACCCTTCTCCTCTTCAACCGAGAGGATGAAGAGGCAGAAGCTGCCGTTTGCGGTGGGGAAAGCGGAGGAAGGTTGTGACGTGTTCAGCGGAAGGTGGGTTTGGGATGAGTTGACTCGACCAATGTATGAGGAATCGGATTGTCCGTACATACAGCCACAATTGACATGTCAGGAACACGGGCGACCCGACAAGGATTATCAGCATTGGAGGTGGCAACCACACGGTTGCGATCTTCCCAAATTCAATGCCAGCTTGGTGCTTGAAACACTTCGTGGGAAGAGGATGATGTTTGTTGGTGATTCCCTCAACCGTGGTCAATATGTCTCTCTCGTATGCCTTATCCATCAACTTATTCCTGAAGATGCCAAATCAATGGAAACCTTTGATTCACTCACTGTATTCACAGCCAAGGAATACAATGCCACAATTGAGTTCTATTGGGCACCATTTCTTCTTGAATCGAATTCGGACAATGCTGTCGTTCATAGGATATCTGATAGGATTGTCAGAAAAGGTTCAATCAATAGGCATGGTCGAAATTGGAAAGGTGTTGACATTATGGTATTCAACACCTATCTTTGGTGGATGACTGGCTTGAAGATGAAGATCTTGCTTGGATCTTTTGATGATGAAGTGAAAGAGATTGTTGAGCTCTCAACAGAGGATGCTTATCGGATGGCTATGAAAAGCATGCTTAGATGGGTAAGGCTAAACATGGATCCAAAGAAAACTAGAGTCGTCTTCACCAGCATGTCACCCTCACATGGAAAGAGCATAGACTGGGGAGGTGAACCAGGAGGGAATTGCTACAATGAAACAACCTTGATTGATGATCCAACATATTGGGGCTCTGACTGTAGGAAGAGTGTAATGGAAGTAATTGGAGAAGTGTTCAGTAAATCCAAAGTGCCCATTACATTTCTAAACATCACCCAGCTCTCTAGTTACCGTAGAGATGCACACACTTCAATATACAAGAAGCAATGGAATCCATTGACTCCAGAGCAATTGGCTAACCCTGTTAGCTATGCTGATTGTGTACACTGGTGTTTACCTGGTCTTCAAGATACTTGGAATGAGCTTTTGTTTGCCAAGTTGTTTTATCCTTGA 1284 0.4494 MQMKPPFSPSSSLFRGKARLSPYLFTLIAFVLFVAILYGEDFMCIFGQQFQNYSYPDKPFSSSTERMKRQKLPFAVGKAEEGCDVFSGRWVWDELTRPMYEESDCPYIQPQLTCQEHGRPDKDYQHWRWQPHGCDLPKFNASLVLETLRGKRMMFVGDSLNRGQYVSLVCLIHQLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVVHRISDRIVRKGSINRHGRNWKGVDIMVFNTYLWWMTGLKMKILLGSFDDEVKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVVFTSMSPSHGKSIDWGGEPGGNCYNETTLIDDPTYWGSDCRKSVMEVIGEVFSKSKVPITFLNITQLSSYRRDAHTSIYKKQWNPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1457 427 Pfam PMR5 N terminal Domain 82 135 IPR025846 -
Apr9g1457 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 427 IPR029962 GO:0016413
Apr9g1457 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 136 422 IPR026057 GO:0016740
Apr9g1457 427 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 11 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1457 Apr-Chr9 24177324 24180104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1457 - - gmx:100785571 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1457 9 24177324 24180104 Apr9g1457 9 24177324 24180104 ECH
Apr10g2147 10 34053970 34057501 Apr9g1457 9 24177324 24180104 PCT