Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2147 ATGCAAATGATGAAACCATCTTCTTCTTCTCCTTCTCTTCTCAGAGCCAAACCTCGCTTTTCTCCTTACCTCTTCACCCTCTTAGCTTTCATTCTCTTTGTTGCCATCCTCTACGGCCATGACTTTCTCTTCATATTCCGCTCACACCTTCAACTCCACTCCAACGATGACACACCCGGTGAGTTGACTCACCCCATTGAATCAAGGGTGGTCTCATCGGAGAAAAGCAACACGGTGATGAAAAAACCGGAGGAAGAAAAAGGGTGTGACGTGTTCAACGGAAGGTGGGTACGCGACGGGTTGACTTGGCCACTGTACGAGGAATCGGAGTGTCCGTACATACAGCCACAGTTGACTTGTCAAGAACACGGGCGACCCGATAAGGATTATCAACGGTGGCGGTGGCAGCCTCACGGTTGCGATCTTCCCACATTCAATGCCAGTTTGATGTTGGAAATGCTCCGAGGGAAGAGGATGATGTTTATTGGAGACTCCCTCAACCGTGGTCAATATGTCTCTTTGATATGTCTTCTCCATGGACTTATTCCTGAACATGCCAAATCAATGGAAACCTTTGATTCACTCACTGTCTTCACTGCCAAGGAATACAATGCTACAATTGAGTTCTATTGGGCACCTTTTCTTCTCGAATCAAACTCCGATAATGCTGTCATCCATAGGGTATCTGATAGAATTGTGAGAAAGGGTTCAATCAATAAGCATGGTCGTTATTGGAAAGGTGCAGACATTGTGGTATTCAACACCTATCTTTGGTGGATAACTGGCTCCAAGATGAAGATCTTGCTAGGATCTTTTAATGATGAAGTGAAAGAGATTGTTGAGCTATCAACAGAAGAGGCCTATCGAATGGCCATGAAAAGTATGGTTAGATGGGTGCAGCAGAACATGGACCCCAACAAGACAAGAGTCTTCTTTACTAGCATGTCACCTTCTCATGCAAAGAGCATAGAATGGGGAGGTGAATCAGAAGGAAATTGCTACAATGAAACAACTCCAATTGATGATCCCACATACTGGGGCTCTGACTCTCTGAAAAGCATAATGCAAGTAATTGAAGAAGTGTTTAATAAATCCAAAGTGCCCATAACATTTCTCAACATTACCCAACTTTCTAGCTACCGCAAAGATGCACACACTTCAATCTACAAGAAGCAATGGAGTCCATTGACTCCAGAGCAAATAGCTAATCCTGCTAGCTATGCTGATTGTGTGCATTGGTGTTTACCTGGACTTCAGGATACTTGGAATGAGCTTCTATTTGCAAAATTATTTTATCCATGA 1302 0.4378 MQMMKPSSSSPSLLRAKPRFSPYLFTLLAFILFVAILYGHDFLFIFRSHLQLHSNDDTPGELTHPIESRVVSSEKSNTVMKKPEEEKGCDVFNGRWVRDGLTWPLYEESECPYIQPQLTCQEHGRPDKDYQRWRWQPHGCDLPTFNASLMLEMLRGKRMMFIGDSLNRGQYVSLICLLHGLIPEHAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRVSDRIVRKGSINKHGRYWKGADIVVFNTYLWWITGSKMKILLGSFNDEVKEIVELSTEEAYRMAMKSMVRWVQQNMDPNKTRVFFTSMSPSHAKSIEWGGESEGNCYNETTPIDDPTYWGSDSLKSIMQVIEEVFNKSKVPITFLNITQLSSYRKDAHTSIYKKQWSPLTPEQIANPASYADCVHWCLPGLQDTWNELLFAKLFYP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2147 433 Pfam PMR5 N terminal Domain 88 141 IPR025846 -
Apr10g2147 433 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 10 433 - -
Apr10g2147 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 433 IPR029962 GO:0016413
Apr10g2147 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 142 428 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2147 Apr-Chr10 34053970 34057501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2147 - - gmx:100782397 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2147 10 34053970 34057501 Apr10g2147 10 34053970 34057501 ECH
Apr10g2147 10 34053970 34057501 Apr9g1457 9 24177324 24180104 PCT