Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1446 ATGGCTAACACGGAAGATCCCAACCCTAACAATGCCACTCAACGCTCCATAAACACCAATGGCGATGCGGAACTCGACGACGAAGATGACGATGACATCGACGACGACGACGAAGAAGAAGACAACGACGACGTCGTTCGGGAATCGAATCGTCGAATTCCCCAATCTGCAGAGTCCAAGTGGCGGGAACAGCGTTTCAAGGTGGAAACCCTGTCCCGGCGGTTGTCGTCGGAGTTGGTTCCTATCCGAGTCCACGACGTGTTTATTAACGGCAACACGAAGACGAAGGATTGGGTGATTGAGGCGGAACTCAAGGGCATCGAAAACGCCACTAGCATGCAGGAGCTTATGCAAGCTTCGCAAATCGCCATTGCGAGGCTTCAGGGGCTCGAAATCTTCGATTCCTGCAAGGTTAGGCTTGAGTCTGGTCCCCGAGAGCTCCCTAACACTGCCAATGTCATCGTCGACGTTGTAGAGACCGATAGCAAAGTTTCCGGCGAATGCGGCGTTTATACCAAACCCTCCACTAGTTCTTGGACTACTGAAGGTACTCTTAAGTATAAAAATTTGTTGGGTTATGGTGATCTCTGGGATGCTTCCTTGGCTTATGGTGCCAACCAAGCAACAGAGGTGAGTGTAGGGGTGTATGCTCCGCGACTTAAAGGGTTATTAACTCCTATTGTGGCACGAATGTCCATGCTTTCCCAAGATTGGCAAGATTCTTCCTCATACAAAGAGCGGTTGCTGGGTGTGTCTCTTGGCTTAGTCTCTACAAAGCACCATGACTTAGCATACACTCTTGGATGGCGTACCTTAACAGATCCATCCCGAATGTCATCCAGGTCTATAAGAAGGCAGCTTGGGCACAGTTTAGTGTCATCTCTGAAGTATACATTTAAAATTGACAGGAGAAATTCACCTATTAGACCAACAAAAGGATATGCTTTTCTCTCCACCACTCACTTTGGTGGCCTTACACCAGATCACCGGAGCTCGCGGTTTCTGCGTCAGGAGTTTGATGTACGCCTTGCTGTCCCTTTTGGGTTTTATAATACAGCAGTAAACCTTGGCATATCTGCTGGTGTTGTTTTTCCATGGGGGCATGGTTTCAAAACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACCCTAGGAGGACCAACAACATTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCACGGAGGCAAGATAGAGAAGGATCTAATGATGACAATGGTGATTCCTCTGGATGGGACTTCATTGGAGGAGATCTCGCTGTTACTGCTTTTGCAGACCTCTCTTTCGATCTTCCAATTAGGTGGTTGAGGGAACATGGAATCCATGGGCATGTTTTTGCTGGTTCTGGGAATACTGCTAAATTAACACAGAATGAATATAAGCACTTCTCTCCTCAAAAGTTCGTAGAATCTTTTCGAACATCAGTGGGATGTGGAATTGTTATTCCTACTAGACTCTTCCGGCTAGAGGGTAATTACTTCTACGTACTCAGGAAGGATGAGCATGATCGTGGGAAGACTGGATTTAGACAAAATAAGAGAGGGCATTGTTTTATTATATTCACAGCGATCTGGTTTTGGAGTGATATTATCCATTTGGGAATCAAATTCATAACATATCAGCCGATGCTCATTGCACTGCAAATGTGCATGAAATTCGAAAATCATGCACTACCTCACTCTCTTTTTCTTGGGTCAACCACAGCTTCCTCTTGTATTGGTTGA 1779 0.4609 MANTEDPNPNNATQRSINTNGDAELDDEDDDDIDDDDEEEDNDDVVRESNRRIPQSAESKWREQRFKVETLSRRLSSELVPIRVHDVFINGNTKTKDWVIEAELKGIENATSMQELMQASQIAIARLQGLEIFDSCKVRLESGPRELPNTANVIVDVVETDSKVSGECGVYTKPSTSSWTTEGTLKYKNLLGYGDLWDASLAYGANQATEVSVGVYAPRLKGLLTPIVARMSMLSQDWQDSSSYKERLLGVSLGLVSTKHHDLAYTLGWRTLTDPSRMSSRSIRRQLGHSLVSSLKYTFKIDRRNSPIRPTKGYAFLSTTHFGGLTPDHRSSRFLRQEFDVRLAVPFGFYNTAVNLGISAGVVFPWGHGFKTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQDREGSNDDNGDSSGWDFIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGSGNTAKLTQNEYKHFSPQKFVESFRTSVGCGIVIPTRLFRLEGNYFYVLRKDEHDRGKTGFRQNKRGHCFIIFTAIWFWSDIIHLGIKFITYQPMLIALQMCMKFENHALPHSLFLGSTTASSCIG* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1446 592 MobiDBLite consensus disorder prediction 402 428 - -
Apr9g1446 592 Pfam Omp85 superfamily domain 189 528 IPR000184 GO:0019867
Apr9g1446 592 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 174 529 - -
Apr9g1446 592 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 4 527 - -
Apr9g1446 592 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 4 527 IPR039910 -
Apr9g1446 592 MobiDBLite consensus disorder prediction 45 63 - -
Apr9g1446 592 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g1446 592 MobiDBLite consensus disorder prediction 1 63 - -
Apr9g1446 592 MobiDBLite consensus disorder prediction 409 424 - -
Apr9g1446 592 MobiDBLite consensus disorder prediction 23 44 - -
Apr9g1446 592 Gene3D membrane protein fhac 81 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1446 Apr-Chr9 24101943 24107542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1446 K07277 - gmx:100802876 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1446 9 24101943 24107542 Apr9g1446 9 24101943 24107542 ECH
Apr10g2134 10 33968988 33972374 Apr9g1446 9 24101943 24107542 PCT