Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1427 ATGATCAATTGCCCACAAGATTGGCCTGAGCCCGTAGTTCGAGTTCAGTCCTTGTCCGAAAAATGCGTAGATTCAATCCCTGAAAGGTATATCAAACCCCTCAGTGATCGTCCTTCCGCTGCAGCTCATGCTGTTGATGCCAACATCCCAATCATTGACCTTGCAGGTCTATATGGCGATGACCCAGATGTCGCAGCCTCTATACTTAACCAAATTTCTCAGGCTTGCAATGAGTGGGGTTTCTTCCAAATCGTGAACCATGGGGTTAGCCCTCACTTGATGGACATGGCTAGGGAAACTTGGCGCCAGTTCTTTCAGTTGCCCATGGAGGTGAAGCAGCAATATGCAAACTCACCAAAAACTTATGAAGGGTATGGTAGCAGGCTTGGAGTTGAGAAAGGTGCCATTCTTGATTGGAGTGATTACTATTATCTTCATTATCTTCCCTTGTCATTGAAGGACTACAACAAATGGCCTGCTCAGCCCACCTCTTGCAGGGAAGTGTTTGATGAGTATGGGAGAGAGTTGGTGAAGTTATGTGGGAGGTTAATGAAGGTTCTGTCAAAAAACCTTGGATTGGAAGAAGATTTTCTTCAGAATGCTTTTGGAGGAGAAGACATTGGGGCGTGCCTAAGGGTGAATTTTTACCCCAAGTGTCCACAGCCAGATTTGACGTTGGGTCTGTCATCTCACTCAGATCCAGGAGGCATGACACTGTTGCTTGCAGATGATCAAGTCCCTGGTCTTCAAGTCCGCAGAGGCCACAATTGGATCACGGTGAAGCCTGTTCCCCATGCGTTCATTGTGAACATTGGTGACCAAATTCAGATTCTAAGCAATGCAATCTACAAGAGTGTAGAGCACAGGGTGCTAGTAAATTCAAACAAAGAGAGAGTTTCCCTGGCCTTCTTCTACAATCCCAAGAGTAACATACCCATAGAGCCAGCCAAGGAGCTGGTAAAGCCAGATCGACCTGCACTCTACTCGGCAATGACCTTCGATGAATACAGGCTCCTCATTAGATTAAGAGGACCATGTGGAAAATCTCAAGTGGAATCTTTAAAATCTCCAAGAAGCATGATCGATAGTTATCAATGA 1098 0.4581 MINCPQDWPEPVVRVQSLSEKCVDSIPERYIKPLSDRPSAAAHAVDANIPIIDLAGLYGDDPDVAASILNQISQACNEWGFFQIVNHGVSPHLMDMARETWRQFFQLPMEVKQQYANSPKTYEGYGSRLGVEKGAILDWSDYYYLHYLPLSLKDYNKWPAQPTSCREVFDEYGRELVKLCGRLMKVLSKNLGLEEDFLQNAFGGEDIGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTLLLADDQVPGLQVRRGHNWITVKPVPHAFIVNIGDQIQILSNAIYKSVEHRVLVNSNKERVSLAFFYNPKSNIPIEPAKELVKPDRPALYSAMTFDEYRLLIRLRGPCGKSQVESLKSPRSMIDSYQ* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1427 365 Gene3D - 10 340 IPR027443 -
Apr9g1427 365 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 355 - -
Apr9g1427 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
Apr9g1427 365 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 355 - -
Apr9g1427 365 SUPERFAMILY Clavaminate synthase-like 11 339 - -
Apr9g1427 365 PRINTS Isopenicillin N synthase signature 72 89 - -
Apr9g1427 365 PRINTS Isopenicillin N synthase signature 267 293 - -
Apr9g1427 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 160 IPR026992 -
Apr9g1427 365 Pfam 2OG-Fe(II) oxygenase superfamily 209 307 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1427 Apr-Chr9 23909201 23920244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1427 15 355 Glycosyltransferase AT5G59530 32.011 3.89e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1427 - - gmx:100794125 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1427 9 23909201 23920244 Apr10g2122 10 33883771 33887792 ECH
Apr9g1427 9 23909201 23920244 Apr9g1427 9 23909201 23920244 ECH