Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2122 ATGTCCAATAACCAACATGATTGGCCCGAGCCCATAGTCCGGGTTCAGTCCTTATCCCAAAGTTGCATAGATTCCATTCCTGAAAGATATATCAAACCCTCTACCGATAGGCCATCCATAAGCTCCTGTAATTTTGATGATGCCAACATACCAATCATCGATCTTGGAGGTCTATATGGTACTGACCCACATGCCCGAACCTCAATCCATAGGCAAATTTCCGAAGCTTGCAAAGAGTGGGGTTTTTTCCAAATCATAAACCATGGTGTTAGCCCCGATTTGATGGACAAGGCTAGGGAAACTTGGCGCCAATTTTTTCACTTGCCCATGGAAGTGAAGCAACAATATGCAAACTCCCCAAAAACTTATGAAGGTTATGGAAGCAGACTTGGAGTTGAGAAAGGTGCTATTCTTGATTGGAGTGATTATTACTATCTTCACTATCTTCCCTTGTCACTCAAGGACTACAACAAATGGCCTTCTTTCCCTCCCTCTTCCAGGGAAGTGTTTGATGAGTATGGGAGAGAGGTGGTGAAGCTAGGGGGGAGGTTGATGAAGGTTTTGTCCATAAACCTTGGATTGGATGAGGAAGTTCTCCAAAATTGTTTTGGGGGTGAAGACATAGGAGCATGTCTAAGAGTGAATTTTTACCCAAAGTGTCCTAAGCCAGAGTTAACGTTGGGTTTGTCATCACACTCAGACCCAGGAGGCATGACTATGTTGCTCCCGGATGATCAAGTTCCTGGTCTTCAAGTTCGCAAACACGATCATTGGATTACTGTAAAACCTGCTCGCCACGCCTTCATCGTCAACATCGGTGACCAAATTCAGGTTCTGAGCAATGCATTGTACAAGAGTGTGGAGCACAGAGTGATAGTAAATTCAGATAAAGAGAGAGTTTCCTTAGCCTTTTTCTACAATCCCAAAAGTGATATACCAATAGAGCCAATAAAAGAGCTTGTAACACAGGATAGGCCTGCACTCTATCCCTCAATGACCTTCGATGAATACAGGCTCTTCATTAGAATGAGAGGACCTCGTGGCAAATCTCAAGTTGAATCTTTGAAGTCTCCAAGATGA 1080 0.437 MSNNQHDWPEPIVRVQSLSQSCIDSIPERYIKPSTDRPSISSCNFDDANIPIIDLGGLYGTDPHARTSIHRQISEACKEWGFFQIINHGVSPDLMDKARETWRQFFHLPMEVKQQYANSPKTYEGYGSRLGVEKGAILDWSDYYYLHYLPLSLKDYNKWPSFPPSSREVFDEYGREVVKLGGRLMKVLSINLGLDEEVLQNCFGGEDIGACLRVNFYPKCPKPELTLGLSSHSDPGGMTMLLPDDQVPGLQVRKHDHWITVKPARHAFIVNIGDQIQVLSNALYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPIKELVTQDRPALYPSMTFDEYRLFIRMRGPRGKSQVESLKSPR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2122 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 207 308 IPR005123 -
Apr10g2122 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 50 161 IPR026992 -
Apr10g2122 359 Gene3D - 10 342 IPR027443 -
Apr10g2122 359 PRINTS Isopenicillin N synthase signature 73 90 - -
Apr10g2122 359 PRINTS Isopenicillin N synthase signature 268 294 - -
Apr10g2122 359 Pfam 2OG-Fe(II) oxygenase superfamily 210 308 IPR044861 -
Apr10g2122 359 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 356 - -
Apr10g2122 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 356 - -
Apr10g2122 359 SUPERFAMILY Clavaminate synthase-like 12 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2122 Apr-Chr10 33883771 33887792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2122 15 356 Glycosyltransferase AT5G59530 31.624 2.76e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2122 - - gmx:100814471 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1427 9 23909201 23920244 Apr10g2122 10 33883771 33887792 ECH
Apr10g2122 10 33883771 33887792 Apr10g2122 10 33883771 33887792 ECH