Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1422 ATGAGCACCGTAAACTACACAATGTTCAAGTGTTTCAACAGAAAATTCGCCGTCTCCGAACAGTCCCCTCCGCAGGACGTCAAGGAAGCCTTCTCCACCTTCGCCGACGGTGTCCCCTCCATGTCCGCCGACCAGCTTCACCGATTCCTGCTCGACCACCAACTCGAACTGGATTGCACCGCAGAGGATTCCCAGCGCGTGGTTGACAACATCTTGCACTCGCGGAAACCGAACGACAATGAGGAATGCGACACCGATGGGCCCCATCGCGGAATTACACTGGACGAGTTCTTCCATTTCATGTTCCTCGTTGATTTCAACGCCCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTATCACATTATTTCATATATACAGGGCACAATTCCTATCTGACTGGGAATCAGCTGAGTAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACAAGGTGTGCGAGTAATTGAACTAGATGTGTGGCCAAATTCAACTAAAGATGATGTCGTCGTGGTTCATGGAAGGACACTTACCGCTCCTGTCTCACTCATCCAGTGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGATTACCCAGTCATTATCACATTAGAAGACCACCTTACACCAGATCTTCAAGCTAAAGTTGCAGACATGACAACTCAAATATTTGGAGACATGCTCTATTATCCTCAGACAGATCTTCTGGCGGAATTTCCCACACCAGAATCGTTGAAAGGTCGAATTCTTATATCAACCAAACCTCCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGTGAAAGGGAATCAACAGAAGAAGGATCATCATCATCACCATGCCTTGGCACTGAAGTGGAAGTTGATGAGAGGTTCAATGGAAGTGATCTCGACGAGGAAGGTTTGAATGCTCGTGAAAAGAAACCAGACCAACAGAGTGCACTTGAATACAAACGTTTGATCACAATCCATGCTGGGAAACCAAAGGGTAATGTAAGAGACCACTTAAACATTATTGGGGATGTAAAGCGCTTGAGCTTGAGTGAACAGGAACTTGAAAAGGCTTCTGCCTCTTATGGATCTGATATTGTTAGATTTACTCAGAAAAATATTATCAGGGTGTATCCAAAGGGAACACGTGTCAACTCCTCAAATTACAGGCCGCATATAGGGTGGATTTACGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGAAGATCACTCTGGTACATGCAAGGGATGTTTAGATCAAATGGTGGGTGTGGTTATGTGAAAAAGCCTGCATTTCTGTTGGAAAAAGGCCCAGATAATAATATTTTTGATCCTAAAAGAACATTGCCATTGAAGACGACATTAAAGGTAAAAGTATATTTGGGAAACGGGTGGAGCACAGATTTCAGCAAAACACACTTTGATGCATTCTCTCCACCAGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAATGCCAATAAGAAGACCAGGGTAATTCAAGATAATTGGTTCCCCGTCTGGGAGGAGGAGTTTGAATTTCCTTTGACTGTTCCAGAACTAGCATTGCTCCGGATAGAAGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGTGGGCAAACATGTTTGCCAATATCTGAGCTAAGATCTGGTTTCCGAGTAGTCTCTCTAAATGATGAGAAGGGCGAGAAATTAAAATCTGTGAAGCTTTTAATGCGGTTTCAGTTCAGTGAACCGGAGGAATCAAGTGAATAA 1794 0.4359 MSTVNYTMFKCFNRKFAVSEQSPPQDVKEAFSTFADGVPSMSADQLHRFLLDHQLELDCTAEDSQRVVDNILHSRKPNDNEECDTDGPHRGITLDEFFHFMFLVDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQQGVRVIELDVWPNSTKDDVVVVHGRTLTAPVSLIQCLKSIKEYAFVKSDYPVIITLEDHLTPDLQAKVADMTTQIFGDMLYYPQTDLLAEFPTPESLKGRILISTKPPKEYLESKQFKDSDSERESTEEGSSSSPCLGTEVEVDERFNGSDLDEEGLNAREKKPDQQSALEYKRLITIHAGKPKGNVRDHLNIIGDVKRLSLSEQELEKASASYGSDIVRFTQKNIIRVYPKGTRVNSSNYRPHIGWIYGAQMVAFNMQGHGRSLWYMQGMFRSNGGCGYVKKPAFLLEKGPDNNIFDPKRTLPLKTTLKVKVYLGNGWSTDFSKTHFDAFSPPDFYTKVCIVGVPADNANKKTRVIQDNWFPVWEEEFEFPLTVPELALLRIEVREYDKHEKDDFGGQTCLPISELRSGFRVVSLNDEKGEKLKSVKLLMRFQFSEPEESSE* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1422 597 SMART C2_3c 462 570 IPR000008 -
Apr9g1422 597 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 589 - -
Apr9g1422 597 SUPERFAMILY EF-hand 3 118 IPR011992 -
Apr9g1422 597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 589 IPR035892 -
Apr9g1422 597 PRINTS Phospholipase C signature 121 139 IPR001192 GO:0035556
Apr9g1422 597 PRINTS Phospholipase C signature 147 167 IPR001192 GO:0035556
Apr9g1422 597 PRINTS Phospholipase C signature 244 261 IPR001192 GO:0035556
Apr9g1422 597 PRINTS Phospholipase C signature 380 401 IPR001192 GO:0035556
Apr9g1422 597 PRINTS Phospholipase C signature 401 419 IPR001192 GO:0035556
Apr9g1422 597 PRINTS Phospholipase C signature 556 566 IPR001192 GO:0035556
Apr9g1422 597 Gene3D Phosphatidylinositol (PI) phosphodiesterase 113 454 IPR017946 GO:0006629|GO:0008081
Apr9g1422 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 116 260 - -
Apr9g1422 597 SMART plcx_3 116 260 IPR000909 -
Apr9g1422 597 SMART plcy_3 326 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr9g1422 597 CDD PI-PLCc_plant 115 429 - -
Apr9g1422 597 CDD C2_PLC_like 460 590 - -
Apr9g1422 597 Pfam C2 domain 463 564 IPR000008 -
Apr9g1422 597 Gene3D - 22 111 - -
Apr9g1422 597 Gene3D C2 domain 458 597 IPR035892 -
Apr9g1422 597 ProSiteProfiles C2 domain profile. 443 572 IPR000008 -
Apr9g1422 597 MobiDBLite consensus disorder prediction 266 282 - -
Apr9g1422 597 MobiDBLite consensus disorder prediction 266 292 - -
Apr9g1422 597 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr9g1422 597 Pfam Phosphatidylinositol-specific phospholipase C, X domain 118 260 IPR000909 -
Apr9g1422 597 SUPERFAMILY PLC-like phosphodiesterases 116 443 IPR017946 GO:0006629|GO:0008081
Apr9g1422 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr9g1422 597 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 589 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1422 Apr-Chr9 23843040 23848089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1422 3 589 Acyl Lipid Metabolism Gene Families AT2G40116 60.328 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1422 K05857 - gmx:100777010 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1422 9 23843040 23848089 Apr10g2114 10 33811737 33816153 ECH
Apr9g1422 9 23843040 23848089 Apr9g1422 9 23843040 23848089 ECH
Apr10g2114 10 33811737 33816153 Apr9g1422 9 23843040 23848089 PCT