Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2114 ATGGCCACTCACAGCTACAAAATCTTCAGCTGCTTTAACAGGAAGTTCACCGTCACCGAAGCGGGCCCACCGGCCGACGTCGAAAAAGCCTTCTCCGAGTTCGCCGGTGGCGATCCCTCCATGTCCGCCGATCAGCTCCTCCGGTTCCTGACGGAGCATCAGGATGAAGTGGACTGCACCACATCGGATTGCCAGCAGATCGTGTTGGAATCGGGGGAACACGATCAGGAAAGTGGATTCACGCTCCACCAGTTCTTCCATTTCTTGCTCTACCATCATTTCAATACCCCTTTGAAATCCCAGGTACATCATGATATGGATGCTCCGTTGTCACATTATTTCATATATACTGGACACAATTCCTATCTTACTGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGACTTGTGGCCCAATTCAACTAAGGATGATATTGATGTAGTTCATGGAAGAACTCTTACCACTCCCGTCTCCCTCATCCAATGTTTGAAGTCCATAAAAGAGAATGCTTTTGTTAAATCTCACTACCCAGTCATTATAACTTTAGAAGATCATCTTACTCCAGATCTTCAAGCTAAAGTTGCAGAGATGGCAACTCAAATATTTGGAGACTTGCTTTATTATCCTCAGACAGATACACTTACGGAATTTCCCACACCAGTATCATTGAAAGGTCGAATTCTTATATCAACCAAACCACCTAAAGAATTTCTTGAATCCACCCAATGTGATGACAAGGACAACGAAAAAGAATCAGCTGAGGAAGAATCATCATCGCCAGACCTTACTGATGAACCGGAAACTGACGATGACAAGAGTGCACCTGAGTACAAAAGCTTGATTACAATCCATGCTGGGAAACCGAAGGGTGATGTACAGGATGAATTAAAAGCTGTTGGTCAAGTCAGGCGCTTAAGCTTGAGCGAACAAAAACTTGAAAAGGCTTCTGACTCTTATGGACCTGATATTGTTAGGTTTACACAGAAGAATATTCTCAGAGTGTATCCAAAGGGAACACGTCTCACCTCCTCAAATTACAAGCCACACATAGGGTGGACGTATGGTGCTCAAATGGTTGCATTTAACATGCAGGGGTATGGTAAATCACTCTGGTTCATGCAAGGAATGTTTAAAGCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGAATTTCTTATTCACAAAGGTCCAAATGATGAGGTTTTTGATCCTAAAATAACACTACCAGTGAAGAAAACCTTAAGGGTAAAAGTTTACTTGGGGAATGGTTGGAGCTCAGATTTCAGCCAAACAGACTTTGATACTTACTCACCACCAGACTTTTTCACTAAGGTTTGTATTGTTGGAGTTCCTGCTGATATAGCCAAGAAGAAAACAAGTGTAGTTTCAAATAATTGGTTTCCCGTATGGGACGAAGAGTTTGAGTTCCCGTTGACTGTTCCAGAGTTGGCTTTGCTCCGCATAGAAGTTAGAGACAATGATAAGCATCAAAAGGATGACTTTGGTGGACAAACATGTTTGCCAGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTGTATGATGACAAAGGAGACAAATTAAAATCTGTGAGGCTTTTAATGCGGTTTCAGTTTCTATGA 1674 0.4283 MATHSYKIFSCFNRKFTVTEAGPPADVEKAFSEFAGGDPSMSADQLLRFLTEHQDEVDCTTSDCQQIVLESGEHDQESGFTLHQFFHFLLYHHFNTPLKSQVHHDMDAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTTPVSLIQCLKSIKENAFVKSHYPVIITLEDHLTPDLQAKVAEMATQIFGDLLYYPQTDTLTEFPTPVSLKGRILISTKPPKEFLESTQCDDKDNEKESAEEESSSPDLTDEPETDDDKSAPEYKSLITIHAGKPKGDVQDELKAVGQVRRLSLSEQKLEKASDSYGPDIVRFTQKNILRVYPKGTRLTSSNYKPHIGWTYGAQMVAFNMQGYGKSLWFMQGMFKANGGCGYVKKPEFLIHKGPNDEVFDPKITLPVKKTLRVKVYLGNGWSSDFSQTDFDTYSPPDFFTKVCIVGVPADIAKKKTSVVSNNWFPVWDEEFEFPLTVPELALLRIEVRDNDKHQKDDFGGQTCLPVSELKSGFRSVPLYDDKGDKLKSVRLLMRFQFL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2114 557 Gene3D Phosphatidylinositol (PI) phosphodiesterase 100 422 IPR017946 GO:0006629|GO:0008081
Apr10g2114 557 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Apr10g2114 557 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Apr10g2114 557 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Apr10g2114 557 PRINTS Phospholipase C signature 347 368 IPR001192 GO:0035556
Apr10g2114 557 PRINTS Phospholipase C signature 368 386 IPR001192 GO:0035556
Apr10g2114 557 PRINTS Phospholipase C signature 523 533 IPR001192 GO:0035556
Apr10g2114 557 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 320 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr10g2114 557 Gene3D C2 domain 423 557 IPR035892 -
Apr10g2114 557 ProSiteProfiles C2 domain profile. 410 539 IPR000008 -
Apr10g2114 557 SMART plcy_3 293 409 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr10g2114 557 CDD PI-PLCc_plant 103 396 - -
Apr10g2114 557 Pfam C2 domain 430 531 IPR000008 -
Apr10g2114 557 SMART C2_3c 429 537 IPR000008 -
Apr10g2114 557 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Apr10g2114 557 SUPERFAMILY PLC-like phosphodiesterases 104 410 IPR017946 GO:0006629|GO:0008081
Apr10g2114 557 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 429 556 IPR035892 -
Apr10g2114 557 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 322 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Apr10g2114 557 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 556 - -
Apr10g2114 557 SUPERFAMILY EF-hand 6 106 IPR011992 -
Apr10g2114 557 MobiDBLite consensus disorder prediction 254 273 - -
Apr10g2114 557 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 556 IPR001192 GO:0035556
Apr10g2114 557 Gene3D - 23 96 - -
Apr10g2114 557 CDD C2_PLC_like 427 556 - -
Apr10g2114 557 SMART plcx_3 104 248 IPR000909 -
Apr10g2114 557 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Apr10g2114 557 MobiDBLite consensus disorder prediction 254 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2114 Apr-Chr10 33811737 33816153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2114 2 556 Acyl Lipid Metabolism Gene Families AT2G40116 60.797 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2114 K05857 - gmx:100799027 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1422 9 23843040 23848089 Apr10g2114 10 33811737 33816153 ECH
Apr10g2114 10 33811737 33816153 Apr10g2114 10 33811737 33816153 ECH
Apr10g2114 10 33811737 33816153 Apr9g1422 9 23843040 23848089 PCT