Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1420 ATGGGGTTTTCAAAGGAAGAGAAATCCAAAAGGATATTGAGGGGTGTGAAGACTTTGTTCTTCTTGATCACCATGGTCATGTCTTTGCTTCTTTTCTCTGCCCCGGTTCTATTGGTTATTGCAGATGCACTTGTTCCTTCTGCTTTACTCTCAGCTCTTTATTCTCCCTCTTCTCTCTCCCTCCAAACTCTCTTCTCCCATTTTGAGAACTATGATTTTCGATACTCCCTCATTGACATACCTTTATTATCTATAATACGTTCCCTTGTCATATTCTGTGTTTATAGTTTTTGTGACGGACCAAGACTTTCCCGTGGGCCTTATTTGGGGATCACCACGGTGTGCTCAGTGATGTCTCTGATATTTGTTTCCTTGAAAGCTGTTTACGTGTTTAGCTTCACGAGTGTTGATGGAGCCTCCCAAATAGCTTTGTTTGTGTGTTCTTGTGCTTTGGCTGTGGGGCATATCGTTGTTGCATACAGAACAAGTTGCAGAGAAAGAAGGAAGCTTCTAGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGCAAAAATGGGTATCCAAGGTATCCGAAGATGCTTAAGGAAGAAAGAGTCAAATGA 603 0.4129 MGFSKEEKSKRILRGVKTLFFLITMVMSLLLFSAPVLLVIADALVPSALLSALYSPSSLSLQTLFSHFENYDFRYSLIDIPLLSIIRSLVIFCVYSFCDGPRLSRGPYLGITTVCSVMSLIFVSLKAVYVFSFTSVDGASQIALFVCSCALAVGHIVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYPKMLKEERVK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1420 200 Pfam Cholesterol-capturing domain 62 153 IPR019498 -
Apr9g1420 200 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 198 - -
Apr9g1420 200 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1420 Apr-Chr9 23825908 23829810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1420 2 192 Miscellaneous Gene Families AT1G80280 42.857 1.13e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1420 - - aprc:113847878 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1420 9 23825908 23829810 Apr9g1420 9 23825908 23829810 ECH
Apr10g2106 10 33753048 33755924 Apr9g1420 9 23825908 23829810 PCT