Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2106 ATGGGTTTTTCCTCCAAAGAAGAGAAATCCAAAAGGATACTAAGAGGTTTGAAGACTGTATTCTTCTTGATCACCATGGTTATATCGCTTCTTCTTTTCTCCGCGCCGGTTCTCCTTGTTATTGCCGATGCACTTGTTCCTTCTGCTTTGCTCTCTACACTCTCCCCTACTTCTCTGTCCTTGGAGACTCTCTCTTCCCATTTCCACAACTACGATTTTCGCTACTCTCTCATTGATATACCCCTTGTCTCCATAATAAGATCCTTCATCATTTTCTGTGTTTATAGTTTATGCGATGGACCAAGGCTTTCTCGAGGGCCTTATTTGGGGATCACGACGATGTGCTCTGTTCTGTCTCTGATGTTTGTGTCGTTGAAAGCTGTTTACATCTTCAGTGTTTCGAGTAAAGGGTACGTTCCAGCCACCGAAATAGCGCTGTTCGTGTGTTCTTGTGCCTTGGCCGTGGGGCATATTGTTGTGGCCTACAGAACAAGTTGCAGAGAAAGACGAAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCGGCTTGCAAAACTGGGTATCCTAGGTATCCGAAGATTCCTCAAGAAGAAAGAGTCAAATGA 609 0.4368 MGFSSKEEKSKRILRGLKTVFFLITMVISLLLFSAPVLLVIADALVPSALLSTLSPTSLSLETLSSHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSRGPYLGITTMCSVLSLMFVSLKAVYIFSVSSKGYVPATEIALFVCSCALAVGHIVVAYRTSCRERRKLLVYKIDIEAISACKTGYPRYPKIPQEERVK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2106 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 200 - -
Apr10g2106 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 200 - -
Apr10g2106 202 Pfam Cholesterol-capturing domain 62 154 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2106 Apr-Chr10 33753048 33755924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2106 8 197 Miscellaneous Gene Families AT1G80280 45.366 2.72e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2106 - - gmx:100811069 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2106 10 33753048 33755924 Apr10g2106 10 33753048 33755924 ECH
Apr10g2106 10 33753048 33755924 Apr9g1420 9 23825908 23829810 PCT