Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1413 ATGCCACAAGGCCTGAAAACAATGTTACCTCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTTAGTGAGACGATTGAGCGTGATGAGAGAGAGGAAGAGAAGGTGGGTAGTAGTAGTTCTTCACATTCTACCTTGAAAAGCCTTCTTTGGCATGGTGGGTCTGTTTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAGCTGGGAATACTTTCAGGCGTCATATTCCAAATCTTCTATGGCCTCGTTGGAAGTTGGACTGCATATTTGATTAGCATTCTGTACATTGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTATTGGGTCCGTACTGGAAAGCCATTGGCTTGGCCTTCAATTGTACTTTTCTACTCTTTGGATCTGTTATTCAGCTCATAGCTTGTGCAAGTAACATATACTACATAAATGACCACTTGGATAAGAGGACTTGGACATACATTTTCGGAGCTTGCTGTGCCACCACAGTGTTCATACCTTCGTTTCATAACTATAGGATTTGGTCTTTCCTTGGCCTTGGCATGACCACGTACACAGCTTGGTACTTGACCATTGCAGCTCTTGTTCATGGCCAGGTTGAAAATGTGACTCATACGGGCCCAAAAAAATTGGTTTTGTATTTCACTGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAGTCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTTTGCTACTCTTTATGTATTCACACTCACCCTCCCATCTGCCACTGCCGTTTACTGGGCCTTTGGTGACCAACTCTTGGACCACTCCAATGCCTTCTCTCTTCTTCCTCGCTCTGGTTGGCGTGATGCGGGTGTCATCTTAATGCTCATTCACCAGTTTATCACTTTTGGATTTGCTTGTACACCATTGTATTTTGTGTGGGAGAAGGTGATTGGAATGCATGACACAAAGAGTATATGTTTGAGGGCTCTTGCAAGGTTGCCTGTGGTGATACCAATCTGGTTTTTGGCTATTATTTTCCCTTTCTTTGGTCCCATTAACTCTGCTGTGGGGGCTCTTTTGGTTAGCTTCACAGTCTATATCATTCCTGCTACTGCTCATATGATCACTTATAGGTCTGCTTCTGCTAGACAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTGCAATGTATGTGATAAATGCATTTGTGGTAGTGTGGGTTCTATTGGTAGGCTTCGGATTTGGAGGGTGGGCTAGCATGTCAAACTTCATCAAACAGGTTGACACATTTGGACTATTTGCTAAGTGCTACCAGTGCCCACCAAAAGCCCCAGTTTCCAATCACACACTGCATCACTGA 1467 0.4417 MPQGLKTMLPQKQGEETMMSSLSETIERDEREEEKVGSSSSSHSTLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGILSGVIFQIFYGLVGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEVMHAMWKPQKFKYIYLFATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRSGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPATAHMITYRSASARQNAAEKLPFFIPSWTAMYVINAFVVVWVLLVGFGFGGWASMSNFIKQVDTFGLFAKCYQCPPKAPVSNHTLHH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1413 488 MobiDBLite consensus disorder prediction 22 38 - -
Apr9g1413 488 MobiDBLite consensus disorder prediction 1 41 - -
Apr9g1413 488 PANTHER AUXIN INFLUX TRANSPORTER 9 478 - -
Apr9g1413 488 Pfam Transmembrane amino acid transporter protein 52 445 IPR013057 -
Apr9g1413 488 PANTHER OS05G0424000 PROTEIN-RELATED 9 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1413 Apr-Chr9 23737188 23741991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1413 32 475 Organic Solute Cotransporters AT2G21050 79.730 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1413 K13946 - gmx:100817572 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1413 9 23737188 23741991 Apr10g2098 10 33689703 33694175 ECH
Apr9g1413 9 23737188 23741991 Apr9g1413 9 23737188 23741991 ECH
Apr10g2098 10 33689703 33694175 Apr9g1413 9 23737188 23741991 PCT