Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2098 ATGTTGCCTCAGAAGCAAGCTGAAGAAGCCATGATGTCAAGCCTCACCCAGATTGAGCTTGAAGAGGAAGAGGAAGTCAAAGGAGAGAGCTCACATATTAGCTTAAAAAATATTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCTAATCAGGTTGCTCAGGTTCTGTTGACTCTGCCTTACTCATTCTCTCAACTGGGAATGCTTTCAGGCATCATATTCCAAATCCTCTATGGCCTGCTTGGTAGTTGGACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTACTGGGTCCATACTGGAAAGCTGCTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCCTGTGCAAGTAACATTTACTACATAAATGACCACTTGGACAAGAGGACTTGGACCTACATTTTTGGAGCATGCTGTGCCACCACAGTGTTCATTCCATCATTCCACAACTACCGGATTTGGTCCTTTATTGGGCTTGGCATGACCACATACACTGCTTGGTATTTGACCATTGCAGCACTTGTTCATGGCCAGGTTGAAAATGTGACCCATTCGGGCCCAAACACGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTATACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTTTATGCAACCCTATATGTGTTCACCCTCACAATACCATCTGCTACTGCCGTTTACTGGGCCTTTGGTGACCAACTTCTGAATCATTCCAATGCCTTCTCACTCCTCCCCCGCTCTGGCTGGCGTGACACCGGTGTCATTCTCATGCTCATTCACCAGTTCATAACGTTCGGGTTTGCTTGTACGCCATTATATTTCGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTAAGGGCTGTGGCCCGGTTACCTGTGGTGATACCAATATGGTTTTTGGCAATTATTTTCCCATTTTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATCATCCCTGCTTCGGCCCATATGCTGACTTACAAATCTGCCTCCGCAAGACAGAATGCCGTGGAGAAATTGCCCTTCTTTATCCCTAACTGGACAGTGATGTACGTGGTGAATGCGTTTGTGGTGGTCTGGGTTCTAGTTGTGGGCTTTGGATTTGGAGGATGGGCCAGTATGACAAACTTCATCAAGCAAGTTGACACATTTGGATTGTTTGCCAAGTGTTACCAATGCCCCCCAAAAGTCCTTCCCTCCAACCACACCTTACATCACTGA 1434 0.4582 MLPQKQAEEAMMSSLTQIELEEEEEVKGESSHISLKNILWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQILYGLLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFIGLGMTTYTAWYLTIAALVHGQVENVTHSGPNTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTIPSATAVYWAFGDQLLNHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRAVARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYKSASARQNAVEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVLPSNHTLHH* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2098 477 PANTHER AUXIN INFLUX TRANSPORTER 2 467 - -
Apr10g2098 477 Pfam Transmembrane amino acid transporter protein 41 434 IPR013057 -
Apr10g2098 477 PANTHER OS05G0424000 PROTEIN-RELATED 2 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2098 Apr-Chr10 33689703 33694175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2098 5 464 Organic Solute Cotransporters AT2G21050 77.174 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2098 K13946 - gmx:100795466 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1413 9 23737188 23741991 Apr10g2098 10 33689703 33694175 ECH
Apr10g2098 10 33689703 33694175 Apr10g2098 10 33689703 33694175 ECH
Apr10g2098 10 33689703 33694175 Apr9g1413 9 23737188 23741991 PCT