Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1412 ATGGTTGATTTATATTGGAAATCGAAGATGATGGCTTCCAACGTCTCCCCCAAACTCTCTCTCCCGGATAAACCAAAACCCCACCTTTCTTTCCCCACCTTGCAACGCACAAACGACATCACCACAACGTCCTCCCATGTTTGCGCTGCATACGACAACTACCTTCGCCTTCCTCAGCTTAGAAACCTCTGGGACTCCAACCACTTCCCCGATTGGCCCAACGAGCCCATCTTAAAGCCCGCCTTCCACGCTTTAGAAATCACGTTTCGCTTCCTCGCAACCGTTTTGTCTGACCCAAGACCCTACCCCAACCGGCGCGAGTGGACTCGGCGGGTCGAGTCGCTCGCCAAGGCCCAGGTCCAAATCATCGCCATGCTCTGCGAAGACGAGGAACAGAACCCCGAGAAACGTGGCAAGGCACCGGTTTGTGACGTCAATGGGATCACCACCCAGAGCAGAAGCTACAGCCATGAAAGCTTGCTTCCCCGTCTCGCCACGTGGCAAAAATCGAAGCACTTGGCGCAGAGGATCCTTTCCACCGTGGAATGCGAGATGATGAGGTGTTCGTACACGTTGGGTCTGGGAGAGACCAATTTTGCGGGAAAGCCGGTTCTCCGTTACGATGCCGTTTGCAGGCCGAACGAGATTCACTCGCTGGAGACGACACCATTTGATCACGTGGAGAATTACGAGAACCGTACGATGCACGCGACGCACCAGATCGTGGAGTCGTGGATACGCGCCTTGCGGGGGTTGTTGGAGAGGGTGACGGAGTCGGTGGAGAGTGGAAGGTTGGAGAAGGCGGCGGGTGAGTGTCACGCGGTGGAGCGGATCTGGAAGTTGGTGGCGGAGGTGGAGGAGATGCATGTGATGATGGATCCGGATGATTTGTTGAGATTGAAGAAGCAGGTGGGGATGAGATCGTGGAAAGAAACGATGGCGTTTTGCTTGAGATCGAAGGAACTGGTGGAGGTGACGAAGATGTGTAGGGATTTGAGGGAGAAGGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCAAGGGTGGGCCTGGGATGGTGGAAGCGGCGATGAAGGTGTACGCGGAGAAGAGGAGTGGGTTCGAGAGGGTTCATGTGTTGCAGGCCATGCAGGGGATTGAGATTGCGATGAAGAGTTTCTTCTACGCTTACAAGCAGGTTGTGACAGTGGTGATGGGAAGCTCTGAGGGGAATGCGAATTCCTTGAGTCAGATATTCCTTGAACCCACCTATTTCCCTAGCTTGGATGCCGCCAAGACCTTTCTCGGTTATTATTGGGAAAATCATCAATATCCCATTTCTTTCTAG 1326 0.54 MVDLYWKSKMMASNVSPKLSLPDKPKPHLSFPTLQRTNDITTTSSHVCAAYDNYLRLPQLRNLWDSNHFPDWPNEPILKPAFHALEITFRFLATVLSDPRPYPNRREWTRRVESLAKAQVQIIAMLCEDEEQNPEKRGKAPVCDVNGITTQSRSYSHESLLPRLATWQKSKHLAQRILSTVECEMMRCSYTLGLGETNFAGKPVLRYDAVCRPNEIHSLETTPFDHVENYENRTMHATHQIVESWIRALRGLLERVTESVESGRLEKAAGECHAVERIWKLVAEVEEMHVMMDPDDLLRLKKQVGMRSWKETMAFCLRSKELVEVTKMCRDLREKVPEILEVEVDPKGGPGMVEAAMKVYAEKRSGFERVHVLQAMQGIEIAMKSFFYAYKQVVTVVMGSSEGNANSLSQIFLEPTYFPSLDAAKTFLGYYWENHQYPISF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1412 441 Pfam Hs1pro-1 protein C-terminus 185 434 IPR009743 -
Apr9g1412 441 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 436 - -
Apr9g1412 441 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 207 428 IPR037217 GO:0019441|GO:0020037|GO:0046872
Apr9g1412 441 Gene3D - 205 315 - -
Apr9g1412 441 Pfam Hs1pro-1 N-terminus 1 182 IPR009869 GO:0006952
Apr9g1412 441 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 436 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1412 Apr-Chr9 23716172 23717853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1412 - - gmx:100778560 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1412 9 23716172 23717853 Apr9g1412 9 23716172 23717853 ECH
Apr10g2097 10 33673817 33675909 Apr9g1412 9 23716172 23717853 PCT