Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2097 ATGGTCGATTTACATTGGAAATCAAAGATGCCAACTTCTGAATTGTCTCCCAAAACTCCCAAACTCTCTCTCTCCGACAAGCCCTCACCCCGCGGCTCCCTACCCTCTTTGCAACTACCCTTCCGCGCCACCGAAATCTCCGCTGCGGCGCCTCCGCTTTGCGCCGCTTACGACCACTATCTCCGCCTCCCTGAGCTCAGAAAGCTTTGGAACTCAAGGGACTTCCCCAACTGGGCCAACGAACCAATCGTAAAACCCGCTTTGCAAGCCTTGGAAATCACGTTCCGCTTTCTCTCTACCGTTTTCTCCGACCTTAGACCCTACTCGAACCGCAGAGAGTGGAACCGCAGGGTAGAGTCCCTCGCCACGCGTCAGATCGAGATCATCGCCATGCTCTGCGAGGACGAGGAACACAATCCCTCCACACGTGGCACCTCACCAACCGCTGATCTCAGCATCAGCCACTGCAAGAGCAGAAGCTACAGCGAGGCGAGCATGCTCCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTAGCGCAGAGGATTCTCCACTCCGTGGAGTGCCAAATGATGAGGTGTCCCTACACGTTAGGTTTGGGAGAACCGAACCTATCAGGGAAACCGAGCCTTCGATACGACGCCGTGTGCAGGCCGAACGAGGTTCACGCACTGCAAACGACGCCGTACGACGACCGCGTGGAGAACTACGAGAACCACGCGGTTCATGCGACGCACCAGATCGTGGAGGCGTGGATCCACGCGTCGCGGAAGCTTCTGGAAAGGATCTCGGACGCGATCGAGGGGAGAAGGTTCGAGAAGGCTGCTGAGGATTGCTACGCGGTGGAGCGGATCTGGAAGCTTCTAGCGGAGGTGGAAGACGTTCACCTGATGATGGATCCAGGCGATTTCTTGCGGCTGAAAAACCAGCTGTCGGTGAAGTCGTCGAGCGGCGAAACGGCGTCGTTTTGCTTCCGGTCGAAGGAACTTGTGGAAGTGACGAAGATGTGCAGGGACCTGAGGCACAGTGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCAAGGGTGGGCCTAGGATTCAAGAGGCGGCGATGAAGCTGTACGTGGCGGAGAAGAAGAGTGAGTTCGAGAAGGTTCACTTGCTTCAAGCGATGCAGGGCATTGAAGCGGCGATGAAGAGGTTCTTCTACGGGTACAAGCAAGTGTTGGCGGTGGTTATGGGGAGTTCCGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACGCGGGTGACTCGTTGACTCAAATATTCCTTGAACCTACCTATTTTCCAAGCTTGGATGCCGCTAAGACCTTCCTTGGCTACTTATGGGATAATAGCGATATTAAATGGGTATGA 1380 0.5572 MVDLHWKSKMPTSELSPKTPKLSLSDKPSPRGSLPSLQLPFRATEISAAAPPLCAAYDHYLRLPELRKLWNSRDFPNWANEPIVKPALQALEITFRFLSTVFSDLRPYSNRREWNRRVESLATRQIEIIAMLCEDEEHNPSTRGTSPTADLSISHCKSRSYSEASMLPRLATWYKSKDVAQRILHSVECQMMRCPYTLGLGEPNLSGKPSLRYDAVCRPNEVHALQTTPYDDRVENYENHAVHATHQIVEAWIHASRKLLERISDAIEGRRFEKAAEDCYAVERIWKLLAEVEDVHLMMDPGDFLRLKNQLSVKSSSGETASFCFRSKELVEVTKMCRDLRHSVPEILEVEVDPKGGPRIQEAAMKLYVAEKKSEFEKVHLLQAMQGIEAAMKRFFYGYKQVLAVVMGSSEANGNRVGLSCDAGDSLTQIFLEPTYFPSLDAAKTFLGYLWDNSDIKWV* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2097 459 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 455 - -
Apr10g2097 459 MobiDBLite consensus disorder prediction 1 31 - -
Apr10g2097 459 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 213 447 IPR037217 GO:0019441|GO:0020037|GO:0046872
Apr10g2097 459 Gene3D - 211 446 - -
Apr10g2097 459 Pfam Hs1pro-1 protein C-terminus 191 453 IPR009743 -
Apr10g2097 459 Pfam Hs1pro-1 N-terminus 1 188 IPR009869 GO:0006952
Apr10g2097 459 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 455 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2097 Apr-Chr10 33673817 33675909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2097 - - gsj:114396435 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2097 10 33673817 33675909 Apr10g2097 10 33673817 33675909 ECH
Apr10g2097 10 33673817 33675909 Apr9g1412 9 23716172 23717853 PCT