Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1394 ATGAAGGGTTCGAGCCGTTTCTTCACGATCGGTTTGGTCTCCGCATGGTACTCTTCCAACATTGGGGTGCTTCTCTTGAACAAGTATCTTCTCAGCAACTATGGCTTCAAGTACCCCATTTTTCTCACCATGTGTCACATGACAGCGTGTTCCTTGTTCAGCTATGTTGCCATAGCTTGGCTCAAAATGGTTCCCATGCAAACGATTCGGTCCAGGGTTCAGTTTTTCAAGATCGCTACTCTTAGCCTTGTTTTCTGTGTATCCGTCGTTTTTGGTAACATTTCACTCCGTTATCTTCCCGTGTCGTTTAACCAGGCTGTCGGCGCCACCACCCCCTTCTTCACCGCTGTTTTTGCTTACATCATGACGTTTAAGAGAGAGGCTTGGCTCACCTACCTCACTCTTGTTCCCGTTGTTACCGGCGTCGTCATTGCTAGCGGGGGTGAACCGAGCTTCCATTTATTTGGGTTCATAATATGTGTGGCAGCAACAGCTGCACGAGCCTTGAAATCTGTGTTGCAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTGCTTCTTTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCTGCTACACTTCTAATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCGCTTGCTTATTTTGTCAACCTGACCAATTTTTTGGTCACCAAACATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGCTAGGTTATTCACTCACAGTCATTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4484 MKGSSRFFTIGLVSAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKMVPMQTIRSRVQFFKIATLSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYIMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLLMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVIGVVLYSEAKKRSK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1394 306 PANTHER - 1 305 - -
Apr9g1394 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Apr9g1394 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
Apr9g1394 306 PANTHER SOLUTE CARRIER FAMILY 35 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1394 Apr-Chr9 23567995 23571254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1394 1 306 Organic Solute Cotransporters AT3G11320 90.850 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1394 - - gmx:100806704 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1394 9 23567995 23571254 Apr10g2081 10 33578210 33584422 ECH
Apr10g0690 10 16927512 16930489 Apr9g1394 9 23567995 23571254 ECH
Apr9g1394 9 23567995 23571254 Apr9g1394 9 23567995 23571254 ECH
Apr10g2081 10 33578210 33584422 Apr9g1394 9 23567995 23571254 PCT