Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2081 ATGGCTCAGATTGCGGTTACTGCTCCAGCAACTGCAATAGCTATAAATGGTAGGGGGAAGCAACTCTATGTTGCAAAAAACAAAGTGATCTTACCCAGTTGGAGGATCGAAAGGGTTTCATTGTTTGCTTCATCAAATTCATATGGGAATAGAAGTGCTGTTGTTAAGGTATCTGAAGGAGCAGCCATCCCTATCACTCATGGTTGGCCATCTCAAAAGGGTTCCGGAGATCAAATTGAAGGTGAGAGAATGAAGGGTTCGAACCGTTTCTTCACGTTTGGGTTGGTGGCATCGTGGTACTCTTCCAACATTGGGGTGCTTCTGTTGAACAAGTACTTGCTCAGCAACTATGGGTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACAGCGTGTTCTTTGTTCAGCTATGTTGCAATAGCGTGGTTGAAGGTGGTGCCCTTGCAAACCATTCGATCCAGGGTGCAGTTCTTCAAGATCTCTGCTCTCAGCCTTGTTTTCTGTGTCTCTGTTGTGTTTGGGAACATATCACTACGTTACCTCCCTGTGTCTTTCAATCAAGCCATTGGTGCCACCACGCCTTTCTTCACTGCTGTTTTTGCTTATCTTATGACCTTCAAGAGGGAGGCTTGGCTCACTTATCTCACCCTTGTTCCTGTTGTTACTGGGGTCATCATTGCCAGTGGGGGTGAACCAAGTTTTCATTTATTTGGATTTATCATATGTGTTGCTGCTACAGCTGCTAGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTACTTTACATGGCTCCAATGGCTGTGGTTTTCCTCCTTCCTGCAACGCTTATAATGGAAGAAAATGTGGTTGGCATCACATTGGCTCTTGCCAGAGATGATGTCAAAATCATTTGGTATCTGCTATTTAATTCGTCACTTGCATATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACATACCAGTGCTCTGACCCTTCAGGTATTAGGGAATGCTAAAGGGGCTGTAGCGGTAGTAGTTTCAATTCTAATATTTAGAAACCCAGTATCAGTCACTGGAATGCTGGGTTACGCGCTCACAGTATTTGGAGTTATACTCTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 1170 0.4393 MAQIAVTAPATAIAINGRGKQLYVAKNKVILPSWRIERVSLFASSNSYGNRSAVVKVSEGAAIPITHGWPSQKGSGDQIEGERMKGSNRFFTFGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKVVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYALTVFGVILYSEAKKRSK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2081 389 PANTHER SOLUTE CARRIER FAMILY 35 43 388 - -
Apr10g2081 389 PANTHER - 43 388 - -
Apr10g2081 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 280 383 - -
Apr10g2081 389 Pfam Triose-phosphate Transporter family 95 382 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2081 Apr-Chr10 33578210 33584422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2081 83 389 Organic Solute Cotransporters AT3G11320 90.554 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2081 - - vra:106757848 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1394 9 23567995 23571254 Apr10g2081 10 33578210 33584422 ECH
Apr10g0690 10 16927512 16930489 Apr10g2081 10 33578210 33584422 ECH
Apr10g2081 10 33578210 33584422 Apr10g2081 10 33578210 33584422 ECH
Apr10g2081 10 33578210 33584422 Apr9g1394 9 23567995 23571254 PCT