Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1353 ATGGCTGCCTCAGTCTCCACTGTTGGAGCTGTCAACGGAGCCCCATTGAGGTTGAACAGCTCTGGAGCTGGAGCTTCAATTCCCAGTTCAGCCTTCTTTGGAAGCAGCTTGAAGAAGGTTATTGCCTCAAGGTTCCCAAACACAAAGATTTCCTCTGGAAGTTTCAAAATTGTTGCTGCAGAGAAAGAGATTGAAGAGACCCAGCAAACTGATCAGGACAGGTGGAAGGGTCTTGCCTATGATGTTTCAGATGATCAACAAGACATCACAAGGGGAAAGGGTATGGTTGATTCACTTTTCCAAGCTTCAATGGATAGTGGAACTCACTATGCAATCATGAACTCTTATGAGTACCTTAGCGCTGGACTTAAACAGTACAACTTGGACAACAACATGGACGGTCTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTGCCAAACATCAAGGTTCCTCTCATTCTTGGTATTTGGGGAGGCAAAGGTCAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAGCCCCATAATGATGAGTGCTGGAGAGCTTGAAAGTGGAAATGCTGGAGAGCCAGCAAAATTGATCAGGCAAAGGTACCGTGAAGCTGCTGATATAATTAAGAAGGGAAAGATGTGTTGTCTCTTCATCAATGATCTTGATGCTGGTGCTGGTCGTCTTGGTGGAACCACCCAATACACTGTCAACAACCAAATGGTGAATGCCACCCTCATGAATATTGCTGATAACCCCACAAATGTTCAGCTCCCTGGTATGTACAACAAGGAAGAGAACCCTCGTGTGCCCATCATTGTCACTGGTAATGATTTCTCAACACTATATGCTCCTCTTATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCACCTACAAGGGAAGACCGCATTGGTGTCTGCAAGGGAATTTTCCGCACTGACAATGTACCTGATGATGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTCCGGGCTAGAGTATATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGCAATGGTTGGGAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCAACCTTTGACCAACCCTGGATGAGTTTGGATAAGCTCTTGGGGTATGGTAACATGCTTGTGCAAGAGCAAGAGAATGTGAAGAGGGTCCAATTGGCAGACAAGTACTTGAGCGAGGCTGCTCTTGGTGATGCTAACGAAGATGCCATTAACAGAGGAACTTTCTATGGCAAAGCAGCTCAGCAAGTAAATATTCCCGTTCCTGAAGGGTGCACTGATCGAAATGCTTCCAACTTTGACCCAACTGCTAGAAGTGACGATGGAACCTGCTTATACACATCTTAA 1437 0.4551 MAASVSTVGAVNGAPLRLNSSGAGASIPSSAFFGSSLKKVIASRFPNTKISSGSFKIVAAEKEIEETQQTDQDRWKGLAYDVSDDQQDITRGKGMVDSLFQASMDSGTHYAIMNSYEYLSAGLKQYNLDNNMDGLYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVAMVGKKLVNSKEGPPTFDQPWMSLDKLLGYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAINRGTFYGKAAQQVNIPVPEGCTDRNASNFDPTARSDDGTCLYTS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1353 478 MobiDBLite consensus disorder prediction 459 478 - -
Apr9g1353 478 Gene3D - 312 424 - -
Apr9g1353 478 MobiDBLite consensus disorder prediction 455 478 - -
Apr9g1353 478 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Apr9g1353 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 337 IPR027417 -
Apr9g1353 478 Gene3D - 127 311 IPR027417 -
Apr9g1353 478 PANTHER - 1 477 IPR044960 -
Apr9g1353 478 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1353 Apr-Chr9 23148046 23151633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1353 - - gmx:100806240 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1353 9 23148046 23151633 Apr10g2040 10 33227731 33231035 ECH
Apr9g1353 9 23148046 23151633 Apr9g1353 9 23148046 23151633 ECH