Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2040 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAACTCTTTTGAGCTTGAATGGGTCTGGAAGTGGAGCTTCAGTTCCTAGTTCAGCTTTCTTTGGCAATAGCTTGAAGAAGACGAACTCAAGAGTCCCCAACAGCAAGGTTTCATGTGGAAGCTTCAGAATTGTGGCTGCAGAGAAAGAGATTGATGAAGACCAACAGACAGACAAAGACAGATGGAAGGGTTTGGCTTACGATGTTTCAGATGACCAGCAAGACATCACAAGGGGAAAGGGTATGGTTGATTCACTTTTCCAAGCTCCAATGGATTCTGGAACTCACTATGCTGTCATGAGTTCTTATGAGTACCTTAGCACTGGACTTCGCCAGTACGACTTGGACAACAACGTAGATGGACTTTACATTGCTCCAGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGTCCTTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATTAACCCCATCATGATGAGTGCGGGAGAGCTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGACAAAGATACCGTGAAGCTGCTGATATAATAAAGAAGGGAAAGATGTGTTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACACAATACACTGTGAACAACCAAATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCCACAAATGTGCAACTTCCTGGTATGTACAACAAGGAAGATAACCCTCGTGTGCCCATCATTGTTACTGGTAATGATTTCTCAACATTGTATGCTCCTCTCATCCGTGATGGCCGTATGGAGAAGTTCTACTGGGCACCAACTAGGGATGACCGCATTGGTGTCTGCAAGGGTATTTTCCGCACTGATGGTGTAGCTGACCAAGACATTGTCACACTTGTTGACACTTTCCCTGGCCAATCTATTGATTTCTTTGGAGCACTGAGGGCTAGAGTATATGATGATGAAGTAAGGAAGTGGGTATCTGGAGTTGGTGTTGACGGTGTTGGGAAAAAGCTTGTGAATTCAAAGGAAGGGCCTCCCACCTTTGAGCAACCCAAGATGAGCTTGGAAAAGCTCTTGCAATATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTCCAATTGGCAGACAAGTATTTGAACGAGGCTGCTCTTGGTGATGCTAACCAAGATGCTATTAAAAGTGGAACTTTCTACAGTAAGACGCAGGCAAAGCAACCTAGCAAGTAA 1350 0.4519 MAASVSTVGAVNRTLLSLNGSGSGASVPSSAFFGNSLKKTNSRVPNSKVSCGSFRIVAAEKEIDEDQQTDKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYEYLSTGLRQYDLDNNVDGLYIAPAFMDKLVVHITKNFLSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRTDGVADQDIVTLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDGVGKKLVNSKEGPPTFEQPKMSLEKLLQYGNMLVQEQENVKRVQLADKYLNEAALGDANQDAIKSGTFYSKTQAKQPSK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2040 449 Pfam ATPase family associated with various cellular activities (AAA) 166 307 IPR003959 GO:0005524|GO:0016887
Apr10g2040 449 Gene3D - 126 310 IPR027417 -
Apr10g2040 449 Gene3D - 311 423 - -
Apr10g2040 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 337 IPR027417 -
Apr10g2040 449 PANTHER - 1 443 IPR044960 -
Apr10g2040 449 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2040 Apr-Chr10 33227731 33231035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2040 - - ccaj:109792417 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1353 9 23148046 23151633 Apr10g2040 10 33227731 33231035 ECH
Apr10g2040 10 33227731 33231035 Apr10g2040 10 33227731 33231035 ECH