Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1322 ATGGTTTCATCTTCTGAACCACCATCTGGAACTCCCGTTCCTCTTCACCGTTCCGCTACTCGCTTTATGCACAAAAATAATTTGCAAGGGTTTGCTCAAAGGTCAAACATTGCATTTCCAATATATCAAACTATCAATGAGGGACAACAACATGCTCCAAAGTTTAGGTCAACGGTGTGGGTGGATGGGACGAGTTTCACTTCCCAAACTACTTTTTTCCATAGAAAAGCTGCTGAACAGGAAGCTGCTAGACTTGCTTTGGAGTGCCTTACCGAAAGAAATAGAGAAGAAGGAACCTCTCGCGTCTGTGAGATTTCTACATTTTGCAAGGCTCTCTTGAACGAATATGCTTCTAAACTGAATCTAGAAAGACCTACATACAACACTGTTCAGCTAGAAGGGGTGATTCCTGTTTTTAAATCTTCTCTAGTTTTCAATGGTATGAGTTACACTGGTGAGGCAGCTAAAAGCAAAAAGGAGGCTGAGCAGTTAGCTGCTCGTGCTGTTATTCTTTCAATTCTGGGTAATTCTGGTTCAGGAACAAAGCTCATTGAGATGATTAAGTCAAAATCTAAACTTTATGACATGTTCAAAGGAAAGGGTTTGCAAGATATTCATGCTAGTGCTGTGTCATCCGCAGCAACTATAAGAAATACCCCTGTTGAACTGGGTAATAAAGATATGGGTGTTGCAGGTTCTGTGGCCAATTATGATAATGAAACTAAAGTTGAATTTCCTGAGTCTTCTAGGACGCTTTCCACGTGTCACGAGTTTCAGATGCCAAAACAAGGATCAGCTCCTGGAACCTCCAACTCTGCAGATGTGTTCCTGCAATCAGGTTCAGCACATTCTACTGATGACAATTCAAGTCTGAAAAATCGGAAAAAGAACAAGAAGGCTAATAAGAAGCCACGGTTGGAATCGAGGTATGTTACTAGTTGCTGCATTTCCCTTGAACCAAGACCCTTCTTGTTCAGTGGCGCAGTAAAAATGTGGAAATGA 1002 0.4152 MVSSSEPPSGTPVPLHRSATRFMHKNNLQGFAQRSNIAFPIYQTINEGQQHAPKFRSTVWVDGTSFTSQTTFFHRKAAEQEAARLALECLTERNREEGTSRVCEISTFCKALLNEYASKLNLERPTYNTVQLEGVIPVFKSSLVFNGMSYTGEAAKSKKEAEQLAARAVILSILGNSGSGTKLIEMIKSKSKLYDMFKGKGLQDIHASAVSSAATIRNTPVELGNKDMGVAGSVANYDNETKVEFPESSRTLSTCHEFQMPKQGSAPGTSNSADVFLQSGSAHSTDDNSSLKNRKKNKKANKKPRLESRYVTSCCISLEPRPFLFSGAVKMWK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1322 333 Gene3D - 95 177 - -
Apr9g1322 333 Gene3D - 11 94 - -
Apr9g1322 333 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 12 301 - -
Apr9g1322 333 SUPERFAMILY dsRNA-binding domain-like 110 173 - -
Apr9g1322 333 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 108 175 IPR014720 -
Apr9g1322 333 PANTHER RIBONUCLEASE III 12 301 IPR011907 GO:0003723|GO:0004525|GO:0006364
Apr9g1322 333 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 23 92 IPR014720 -
Apr9g1322 333 Pfam Double-stranded RNA binding motif 25 88 IPR014720 -
Apr9g1322 333 Pfam Double-stranded RNA binding motif 110 170 IPR014720 -
Apr9g1322 333 MobiDBLite consensus disorder prediction 260 304 - -
Apr9g1322 333 MobiDBLite consensus disorder prediction 260 287 - -
Apr9g1322 333 SUPERFAMILY dsRNA-binding domain-like 24 91 - -
Apr9g1322 333 SMART DRBM_3 24 91 IPR014720 -
Apr9g1322 333 SMART DRBM_3 109 174 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1322 Apr-Chr9 22865470 22869954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1322 - - aprc:113846998 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1322 9 22865470 22869954 Apr10g2011 10 32991666 32994365 PCT