Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1300 ATGACACTCTCACTCATAATTTTTCTTCTTTCTGTGATTTCATTTCCTCGTTTTTCGGTGTCTTCCTCCACAAGCGAGTTCCTCTACAGCGGGTGCACGCAGCAAAGGTACACCCCTAACTCGGCCTACGAGTCCAACCTCGACTCGCTACTCACCTCTCTGGTCAACTCAGCCACGTACTCGTCCTACAACAACTTCACCATAGTGGGCTCCACTCCTCAAGACGTCGTGTACGGCCTCTACCAGTGCCGCGGTGACCTCGCCATGCCGGACTGCGCCACCTGCGTGGCGCGTGCCGTCACGCGCGCCGGCGACCTCTGCCGCGAAACCTGCGGCGGCGCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACGCCACGTTCCTCGGCGTGGAGGACAAGACGGTGGTGCTGAAGCAGTGTGGGCCCTCCGTGGGGTACAACCCCGACGCCATGGGGAGTAGGGATGCCGTGCTCGCCGGACTAGCCGGCTCCGGCGGGAATTTTCGTGTCGGCGGTTCCGGCGGTGTTCGCGGCGTGGCTCAATGCTCCGGCGACTTGAGTTCCGGCGAGTGTGAGGATTGCGTTTCGGAGGCGATATCGCGGCTGAAAAGTGATTGTGGTACGGCGGATTATGGGGACATGTTTTTGGGGAAGTGTTATGCGAGGTATTCGACCGGTGGGGCCCATCATGAGTCCAAGGCCCACGGTAAGGCCCATCATATGCTGTTTCATAAGGAAGGTCAAAAGACATTTGCTATAATTATTGGATCATTAGCAGGAGTAGCTATACTTATTATTTTTCTTGCTTTCTTGAGCAAGATTTGTGGGCGACAAGGTAAATAA 849 0.563 MTLSLIIFLLSVISFPRFSVSSSTSEFLYSGCTQQRYTPNSAYESNLDSLLTSLVNSATYSSYNNFTIVGSTPQDVVYGLYQCRGDLAMPDCATCVARAVTRAGDLCRETCGGAVQLDGCFVKYDNATFLGVEDKTVVLKQCGPSVGYNPDAMGSRDAVLAGLAGSGGNFRVGGSGGVRGVAQCSGDLSSGECEDCVSEAISRLKSDCGTADYGDMFLGKCYARYSTGGAHHESKAHGKAHHMLFHKEGQKTFAIIIGSLAGVAILIIFLAFLSKICGRQGK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1300 282 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Apr9g1300 282 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 279 - -
Apr9g1300 282 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 6 279 - -
Apr9g1300 282 Pfam Salt stress response/antifungal 175 227 IPR002902 -
Apr9g1300 282 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Apr9g1300 282 ProSiteProfiles Gnk2-homologous domain profile. 130 230 IPR002902 -
Apr9g1300 282 Gene3D - 155 228 IPR038408 -
Apr9g1300 282 Gene3D - 23 129 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1300 Apr-Chr9 22646764 22648148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1300 9 234 Receptor kinase-like Gene Family AT4G05200 26.749 6.76e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1300 - - gmx:100800560 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1994 10 32836604 32838612 Apr9g1300 9 22646764 22648148 PCT