Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1994 ATGGCGAAAACAAAAACAAACCTCTCCCTCTCAATCTTCTTCGCCGTTCTTTCACTCTCCAATTTCCCTTTTTCTCTCTCTTCCTCCACGGATTTCTTTCTCTACGGCGGGTGCACGCAGCTACGCTACACCCCCAACTCGCCCTACGAGTCCAACCTCAACTCGCTCCTCACCTCGCTCGTCAACTCAGCCACCTACGCCTCCTACAACAACTTCACCGTCGTGGGTTCCAGCCCAAACGACGTTGTTTACGGTCTCTACCAGTGCCGCGGCGACCTCGCCATGCCAGACTGCGCAACCTGCGTCGCACGCGCTATCTCACGCGCCGGCGAACTCTGCCCGGCGACGTGCGGCGGCGCGGTGCAACTCGACGGTTGTTTCGTGAAGTATGACAATGCAACGTTTTTGGGAGTTGAAGACAAAACGGTTGTGCTGAGGAAGTGTGGTCCCTCCGTTGGGTACCAATCGGGTGCGATGGGAGTGAGGGATTCGGTTCTTAACGGGTTGGCGGGTTCGGGCGGTAATTTTCGGGTTGGCGGGTCGGGTGAGTTGAAGGGTGTGGCGCAGTGTACTGGGGATTTGAGTTTTGCGGAGTGTCAAGATTGCGTTGCGGAGGCGATCAAACGGCTGAGAAGCGATTGTGTTGGTGGCAATTTTGGTGATATGTTCTTGGCCAAGTGTTATGCCAGGTACTCTACCACTGGGGCCCATGTTTACACCACGGCCCATGGAGCCAAATCGAGCAACGATGGTGAAAAGACATTTGCCATAATTATTGGATTATTAGCAGGTGTAGCAATACTTATTATTTTCCTTGCTTTCTTGAGAAGGATTTGTGAGGGACAAGGTAAATAA 855 0.531 MAKTKTNLSLSIFFAVLSLSNFPFSLSSSTDFFLYGGCTQLRYTPNSPYESNLNSLLTSLVNSATYASYNNFTVVGSSPNDVVYGLYQCRGDLAMPDCATCVARAISRAGELCPATCGGAVQLDGCFVKYDNATFLGVEDKTVVLRKCGPSVGYQSGAMGVRDSVLNGLAGSGGNFRVGGSGELKGVAQCTGDLSFAECQDCVAEAIKRLRSDCVGGNFGDMFLAKCYARYSTTGAHVYTTAHGAKSSNDGEKTFAIIIGLLAGVAILIIFLAFLRRICEGQGK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1994 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 280 - -
Apr10g1994 284 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 11 280 - -
Apr10g1994 284 Gene3D - 30 135 IPR038408 -
Apr10g1994 284 Gene3D - 154 234 IPR038408 -
Apr10g1994 284 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Apr10g1994 284 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
Apr10g1994 284 Pfam Salt stress response/antifungal 181 233 IPR002902 -
Apr10g1994 284 Pfam Salt stress response/antifungal 38 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1994 Apr-Chr10 32836604 32838612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1994 24 231 Receptor kinase-like Gene Family AT4G23280 28.125 3.03e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1994 - - gmx:100811615 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1994 10 32836604 32838612 Apr9g1300 9 22646764 22648148 PCT