Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1079 ATGGGAGAGCAAGTACAACAGGAACAACCCAAGGCTGAAACCAAGCCTGAGGAGAAGAAAGAACAGCTTGAGGAAACGAAAGAAGAAAAACAAGAGGAAAAGCCAGCAGAGGAGAAGAAGGAAGAGACTAAACCACCTTCCCCATGTGTGCTATTTGTGGACTTGCATTGTGTGGGATGTGCCAAGAAAATTCAGAGATATATCATGAAAATGAGAGGTGTTGAGGGAGTGGTAATTGACATGACAAAAAATGAAGTGACCATAAAGGGTATAGTTGAGCCTCAAGCGATCTGCAACATAATTACCAAGAAAGCAAAGAGAAGAGCCAATGTTATATCTCCATTGCCTGCAGCAGAAGGAGAACCTATACCAGAAGTTGTCAATTCTCAGGTCAGTGGACCAGTTACTGTGGAACTTAATGTAAATATGCACTGTGAGGCCTGTGCTGAGCAACTCAAGAGGAAGATACTACAAATGAGAGGTGTTCAAACAGCATTGACAGAGTTTAGCACAGGGAAGGTTCTTGTGACAGGAACTATGGATGCAAACAAGCTAGTGGATTATGTCTATAGACGCACCAAAAAGCAAGCCAAGATAGTTCCTCAGCCAGAACCTGAACCAGAAAAGAAAGAAGAGAATAAAGAAGCTGAGAAACCTGCAGAAGAAGAGGCTAAACCTGAAGAGAAGAAAGAAGAGGAAAAGCCACCAGAAGAACCAAAGAAAGAAGAGGGTGGTGAAGGTGCTGACAAGAAGAATGAGAACAAAGAAGAAAAGGGTGGTGAAGAAAGCAAAGAAGAAGCCAAAAAAGAGGAGAATGTGGTAATGGCTAACATTGATGACGAAGGCATGAAGAGGATGATGTACTATTACCACTACCCTCCACTCTATGTTATTGAACGTCTACCACCTCCTCAACTCTTCAGTGATGAAAATCCTAATGCATGCTGCATTACATGA 957 0.4242 MGEQVQQEQPKAETKPEEKKEQLEETKEEKQEEKPAEEKKEETKPPSPCVLFVDLHCVGCAKKIQRYIMKMRGVEGVVIDMTKNEVTIKGIVEPQAICNIITKKAKRRANVISPLPAAEGEPIPEVVNSQVSGPVTVELNVNMHCEACAEQLKRKILQMRGVQTALTEFSTGKVLVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEENKEAEKPAEEEAKPEEKKEEEKPPEEPKKEEGGEGADKKNENKEEKGGEESKEEAKKEENVVMANIDDEGMKRMMYYYHYPPLYVIERLPPPQLFSDENPNACCIT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1079 318 Coils Coil 250 270 - -
Apr9g1079 318 Gene3D - 133 199 - -
Apr9g1079 318 Gene3D - 47 110 - -
Apr9g1079 318 SUPERFAMILY HMA, heavy metal-associated domain 50 104 IPR036163 GO:0046872
Apr9g1079 318 MobiDBLite consensus disorder prediction 10 45 - -
Apr9g1079 318 CDD HMA 55 109 IPR006121 GO:0046872
Apr9g1079 318 MobiDBLite consensus disorder prediction 1 46 - -
Apr9g1079 318 MobiDBLite consensus disorder prediction 197 273 - -
Apr9g1079 318 ProSiteProfiles Heavy-metal-associated domain profile. 142 176 IPR006121 GO:0046872
Apr9g1079 318 SUPERFAMILY HMA, heavy metal-associated domain 131 195 IPR036163 GO:0046872
Apr9g1079 318 CDD HMA 138 178 IPR006121 GO:0046872
Apr9g1079 318 Pfam Heavy-metal-associated domain 140 186 IPR006121 GO:0046872
Apr9g1079 318 Pfam Heavy-metal-associated domain 51 102 IPR006121 GO:0046872
Apr9g1079 318 ProSiteProfiles Heavy-metal-associated domain profile. 55 103 IPR006121 GO:0046872
Apr9g1079 318 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 318 IPR044258 GO:0046872
Apr9g1079 318 Coils Coil 13 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1079 Apr-Chr9 20228556 20231033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1079 - - ccaj:109790710 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1079 9 20228556 20231033 Apr1g0589 1 7147131 7149398 PCT