Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0589 ATGGGTGAGGAAGCTAAACAGGAACCAACTAAGGTTGAGTCTAAGCCAGAGGAAAAGCCAGCAGAAGAGAAGAAAGAAGAGAAACCAGTAGTAGAGGAGAAGAAAGAGCCTAAACCACAATCTCCATGTGTGTTGTTTGTAGACTTGCATTGTGTGGGATGCGCCAAGAAAATTCAGAAATATATTATGAAAATGAGAGGAGTTGAGAGAGTGGTGTTTGATATGGCTAAAAATGAAGTAACCATAAAAGGAATAGTGGAGCCTCAAGCAATCTGTAACATGATTACAAAGAAAACAAAGAGAATAGGCCAAGTTTTATCTCCATTGCCAGTAGCAGAAGGAGAACCTATACCAGAAGTTGTTACTTCTCAGGTTAGTGGACCGGTTACTGTGGAACTTAATGTAAACATGCATTGTGAGGCCTGTGCTGAGCAGCTCAAGGGAAAGATACTCAAAATGAGAGGAGTTCAAACAGCAGTGGCAGAATTTAGCACAGGGAAGGTTATTGTGACAGGGACCATGGATGCAAACAAGCTAGTGGACTATGTCTATAGACGGACCAAAAAGCGAGCCAAAATAGTTCCCCAACCCGAACCTGAGCCAGAAAAAGAAAAAGAATATAAAGAAGCTGAGAAACCTACAACAACAGAAGCGGCTAAACCTGAAGGAAAGAAAGAAGAAGAGACAGAGAGTAAAGAAGAGGAGAAACCAGCAGAGGAACCCAAGAAAGAAGAAGAGGGTGGAGAAGGTGGCAAGGATATGAATGAGAATAAAGAAGAAAAGGGTGGCGAAGAAGAAGCCAAGAAAGAAGTGGGTGGTGATGAGAATGAAGTAGTGTTTAACGTTGATGAGGAAGACACGAAGAGGGTGATGTATTATTACCAGCCACTCTATGTCATTGAACGAATCCCACCCCCTCAGCTATTTAGTGAGGAAAATCCCAATGCATGTTGCATTTCATGA 963 0.4216 MGEEAKQEPTKVESKPEEKPAEEKKEEKPVVEEKKEPKPQSPCVLFVDLHCVGCAKKIQKYIMKMRGVERVVFDMAKNEVTIKGIVEPQAICNMITKKTKRIGQVLSPLPVAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAEFSTGKVIVTGTMDANKLVDYVYRRTKKRAKIVPQPEPEPEKEKEYKEAEKPTTTEAAKPEGKKEEETESKEEEKPAEEPKKEEEGGEGGKDMNENKEEKGGEEEAKKEVGGDENEVVFNVDEEDTKRVMYYYQPLYVIERIPPPQLFSEENPNACCIS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0589 320 ProSitePatterns Heavy-metal-associated domain. 134 163 IPR017969 GO:0046872
Apr1g0589 320 ProSiteProfiles Heavy-metal-associated domain profile. 49 97 IPR006121 GO:0046872
Apr1g0589 320 Gene3D - 40 102 - -
Apr1g0589 320 Gene3D - 127 193 - -
Apr1g0589 320 CDD HMA 132 172 IPR006121 GO:0046872
Apr1g0589 320 SUPERFAMILY HMA, heavy metal-associated domain 125 185 IPR036163 GO:0046872
Apr1g0589 320 MobiDBLite consensus disorder prediction 193 281 - -
Apr1g0589 320 ProSiteProfiles Heavy-metal-associated domain profile. 136 170 IPR006121 GO:0046872
Apr1g0589 320 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 320 IPR044258 GO:0046872
Apr1g0589 320 SUPERFAMILY HMA, heavy metal-associated domain 44 98 IPR036163 GO:0046872
Apr1g0589 320 MobiDBLite consensus disorder prediction 1 34 - -
Apr1g0589 320 CDD HMA 49 97 IPR006121 GO:0046872
Apr1g0589 320 Pfam Heavy-metal-associated domain 45 93 IPR006121 GO:0046872
Apr1g0589 320 Pfam Heavy-metal-associated domain 134 180 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0589 Apr-Chr1 7147131 7149398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0589 - - jre:109007520 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0589 1 7147131 7149398 Apr1g0589 1 7147131 7149398 ECH
Apr9g1079 9 20228556 20231033 Apr1g0589 1 7147131 7149398 PCT