Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1074 ATGGGAAGAATTCCAAGGACTGAAAATTATGCAATCGCCTCTTCAATGCAAGAAAACCAACAACAACCTTGTATTACCTGCACCACTTTTAACATTCTAGCCCCCATATACAAACGCCTCAACCATGAGCAGGATCAAAGTTGCCGTGAAAGTGACTACAAAGCGTCTTGGTTGGCTAGGAATCACAGTATATTGGATTGGTTGTTGTATGAGAGATCTTCCATTATCTGCCTTCAGGAATTTTGGGTTGCAAACGAAGAGCTTGTTAATTTGTATGAGAAGAGACTTGGTGATGCTGGTTATATTAACTTCAAGCTTGGAAGGACTAACAATCGTGGTGATGGTCTTCTGATGGCAGTGCAAAAGGAAAATTTTACAGTTCTAAATTATAAGGAGTTGCACTTCAATGATTGTGGTGACCGAGTAGCTCAATTGTTACATGTTGAGTTAGCTTTTCCATTTTCACAATACCAAAACAGTGATATTAGGCAGGAAATTCTTATTGTCAACACTCACCTACTATTCCCTCATCATTCAAGTCTTTGCCTTGTACGATTGCATCAAGTCTACAAGATGCTTCAATATGTGGAATCTTATCAGAAAGAGTACCAACTTAAGCCTTTACCAATTATGCTATGCGGTGATTGGAATGGAAGCAAAAGGGGACATGTTTACAAGTTCCTGAGGTCTCAGGGGTTTGTTTCATCGTATGATACTGCACATCATTACACTGATGCTGATGCTCACAAGTGGGTTAGCCACCGCAATCATCTGGGAAATATTTGTGCTGTTGATTTTATATGGCTTCTTAATCCTGGCAAATATCAAAAACTACCTAAAACAAGTTGGAGTGAAGCAGTATTTGACATGTTTAAGTGTCTATTGCGAAGAACTTCACTGACAGAGAGTGATGCATTTGCTTTTCTAAAGGCTGAAAATGAAGATTGCATTACCTACTATAGTTTCTGTGAAGCACTTCAACAGCTTAATTTAATTGGTCATTGCCATGGATTAGGTGTTGAAGAAACAAAGGAGTTGTGGGTCCAAGCAGATATAGATGGAAATGGTGGTGTTGATTATAAAGAATTTCTGCAGCAAATATGGAATCCAACAGGATCAGATAAAAAAAGAGATGACAAGCAGAATGGGCAACAAGATGATGAGCCAAATGAGGGTGAGGTACAAACAATTGGTTTTAGAGTGAAAAATGCAGTTCTATTCCCTTCAGAGGTGGAAAAGGGTAGGTGGCCTGAAGACTATTCCCTATCTGATCATGCAAGACTCACTGTAGTGTTCTCACCTATAAGAATGCCATGA 1317 0.3918 MGRIPRTENYAIASSMQENQQQPCITCTTFNILAPIYKRLNHEQDQSCRESDYKASWLARNHSILDWLLYERSSIICLQEFWVANEELVNLYEKRLGDAGYINFKLGRTNNRGDGLLMAVQKENFTVLNYKELHFNDCGDRVAQLLHVELAFPFSQYQNSDIRQEILIVNTHLLFPHHSSLCLVRLHQVYKMLQYVESYQKEYQLKPLPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHHYTDADAHKWVSHRNHLGNICAVDFIWLLNPGKYQKLPKTSWSEAVFDMFKCLLRRTSLTESDAFAFLKAENEDCITYYSFCEALQQLNLIGHCHGLGVEETKELWVQADIDGNGGVDYKEFLQQIWNPTGSDKKRDDKQNGQQDDEPNEGEVQTIGFRVKNAVLFPSEVEKGRWPEDYSLSDHARLTVVFSPIRMP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1074 438 MobiDBLite consensus disorder prediction 372 387 - -
Apr9g1074 438 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 437 - -
Apr9g1074 438 SUPERFAMILY DNase I-like 14 239 IPR036691 -
Apr9g1074 438 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 437 - -
Apr9g1074 438 MobiDBLite consensus disorder prediction 370 393 - -
Apr9g1074 438 Pfam Endonuclease/Exonuclease/phosphatase family 29 236 IPR005135 GO:0003824
Apr9g1074 438 Gene3D Endonuclease/exonuclease/phosphatase 4 436 IPR036691 -
Apr9g1074 438 SUPERFAMILY EF-hand 304 368 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1074 Apr-Chr9 20171260 20174756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1074 2 332 EF-hand Containing Proteins AT5G54130 75.000 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1074 - - gmx:100792805 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1074 9 20171260 20174756 Apr1g0586 1 7115371 7119747 PCT