Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0586 ATGAGAACGGATAGGTGGGCTAAGAGTATGGGAAGGATTTCAAGGATTGGGAGTTTTGCAATTGCTTCATCCATTAAGGAAAACCAACAACAACCTTGTATTACCTGCACCACTTTTAACATTCTCGCTCCCATATACAAGCGCATCAACCATGAGCAGGACCCGAGTTGTCGCGAGAGCGATTATAGAACGTATTGGTTGGCCAGGAATCACAGAATATTGGATTGGTTGTTGAATGAGAGGTCTTCCATTATTTGTCTCCAGGAGTTTTGGGTTGGGAACGAAGAGCTTGTTAATTTGTATGAGAATAGACTTGGCGACGCTGGTTATGTCAGTTTCAAGCTTGGAAGGACCAACAACCGTGGAGACGGTCTTCTGATAGCAGTTCAAAAGGAATACTTCAATATTCTTAATTATAAGGAATTGCACTTCAATGACTGCGGGGATCGTGTAGCTCAGTTGTTACATGTTGAACTAGCTTCTCCGTTTTCACAGTGGCGAAACAGTAATGTTAGGCAGGAAATTCTAATTGTGAACACTCATCTGTTATTTCCTCACGATTCAACTCTATCCCTTGTACGACTGCAGCAGGTCTACAAGATACTTCAATACGTAGAATCATATCAGAACGATTTCCAACTCAAGTCAATGCCAATCATGCTATGCGGTGACTGGAATGGAAGCAAACGGGGACATGTCTACAAGTTCCTGAGGTCTCAGGGCTTTGTATCATCTTATGATACTGCACATCATTACACTGATGCAGATGCTGACAAGTGGGTTAGCCACCGCAATCATCGGGGAAATATCTGTGCTGTTGATTTTATTTGGCTACTAAATCCTGACAAATATCGAAAACTACTAAAAGCAAGTTGGAGTGAAGCAGTGTTTGGAATGTTCAAGTACCTATTGCGGAGAGCTTCACTGAATGAGAGTGATGCATTCGCCTTTCTAAAGGCCGACAATGAAGATTGTATTACCTACTCTGGTTTCTGTGAAGCACTTAGGCAGCTCAATTTAACTGGTCATTGCTATGGGTTGACTGAGGAAGAGATAAAGGACTTGTGGCCCCAAGCAGATGTAGATGGAAACGGTGTTCTTGATTATAAAGAATTTCTGCAGCATATCTGGAATTCAACAAGTCCAGATCAGATAGATGACAACAAGAATGGAGAACTGGAAGACGGTTCAAAGGATGCACTGGAGCAAACAATTGGTTTTAGTGTAAAAAATGCAGTTCTGTTCCCTCCAGAGGTCGAGAAAGGTAGATGGCCTGAAGATTACTCCCTTTCTGATCATGCTCGTCTCACTGTAGTTTTCTCACCAATAAGAATGCCATGCTCCCAGTTGATTTGCTAA 1359 0.4231 MRTDRWAKSMGRISRIGSFAIASSIKENQQQPCITCTTFNILAPIYKRINHEQDPSCRESDYRTYWLARNHRILDWLLNERSSIICLQEFWVGNEELVNLYENRLGDAGYVSFKLGRTNNRGDGLLIAVQKEYFNILNYKELHFNDCGDRVAQLLHVELASPFSQWRNSNVRQEILIVNTHLLFPHDSTLSLVRLQQVYKILQYVESYQNDFQLKSMPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHHYTDADADKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLLRRASLNESDAFAFLKADNEDCITYSGFCEALRQLNLTGHCYGLTEEEIKDLWPQADVDGNGVLDYKEFLQHIWNSTSPDQIDDNKNGELEDGSKDALEQTIGFSVKNAVLFPPEVEKGRWPEDYSLSDHARLTVVFSPIRMPCSQLIC* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0586 452 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 448 - -
Apr1g0586 452 Gene3D Endonuclease/exonuclease/phosphatase 18 445 IPR036691 -
Apr1g0586 452 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Apr1g0586 452 Pfam Endonuclease/Exonuclease/phosphatase family 38 246 IPR005135 GO:0003824
Apr1g0586 452 SUPERFAMILY EF-hand 263 379 IPR011992 -
Apr1g0586 452 SUPERFAMILY DNase I-like 26 248 IPR036691 -
Apr1g0586 452 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 448 - -
Apr1g0586 452 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0586 Apr-Chr1 7115371 7119747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0586 11 340 EF-hand Containing Proteins AT5G54130 78.550 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0586 - - gmx:100779780 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0586 1 7115371 7119747 Apr1g0586 1 7115371 7119747 ECH
Apr9g1074 9 20171260 20174756 Apr1g0586 1 7115371 7119747 PCT