Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1010 ATGGAAAAGACCGACAGAGACTCATCCTTGTACGACATCGTTTTGCAGGTGGGTCTGGTCCTGGTAATGATCTTCTCTTACCTCTTCATGCACGACGTTCCCAAAAGGGTGTTGGCCAAGCTCCGTCTGAGAAACCGCGCCGACATCCAAGCCAAGCGTCACTTTGTCCATGGAGCCCAACTTCTGGCCCGAGCCCGATCCTCCAAGTCCCGGCCCATGGCCAAGGAAGCCCAGGCCCAGGCCCAACAGGCCATCGCCCTCGACCCTAACGACGCCGCCCCTCACCTTCTTAAGGCCCTCGCCCTCGATTTCCTAGGCCTCCGCTCCGCTGCCCTCGACTCTCTCGACGAAGCCCTCTCCTCACGCGCCGCTAAGTCCCTCACCGATATGGAGCGTGGAGACGCACTCCTCAAGAGAGCCGAGTTGAGACTCGGCACGAGTCAACGCGGCCGAGTCGACTCAGCCCTCGATGATTTAACCGAATCGATTAAGTTAAGCCCCAACAATGCGAAGGCTTTTTGCGCGTTGGGAGAGTGCTACGAGCGAAAGAAGATGAACGAGGATGCCATTAAGGCTTACAAAGAAGCTCTACGGTTGGAACCACAATTGCGGGTGGCTCAACAAGCTCTCCACAATTTGGAGAACAATTGA 651 0.5653 MEKTDRDSSLYDIVLQVGLVLVMIFSYLFMHDVPKRVLAKLRLRNRADIQAKRHFVHGAQLLARARSSKSRPMAKEAQAQAQQAIALDPNDAAPHLLKALALDFLGLRSAALDSLDEALSSRAAKSLTDMERGDALLKRAELRLGTSQRGRVDSALDDLTESIKLSPNNAKAFCALGECYERKKMNEDAIKAYKEALRLEPQLRVAQQALHNLENN* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1010 216 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
Apr9g1010 216 Gene3D Tetratricopeptide repeat domain 128 216 IPR011990 GO:0005515
Apr9g1010 216 PANTHER - 10 213 - -
Apr9g1010 216 SUPERFAMILY TPR-like 70 204 IPR011990 GO:0005515
Apr9g1010 216 SMART tpr_5 133 169 IPR019734 GO:0005515
Apr9g1010 216 SMART tpr_5 92 125 IPR019734 GO:0005515
Apr9g1010 216 SMART tpr_5 170 203 IPR019734 GO:0005515
Apr9g1010 216 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 213 - -
Apr9g1010 216 Pfam Tetratricopeptide repeat 170 202 IPR001440 GO:0005515
Apr9g1010 216 Gene3D Tetratricopeptide repeat domain 36 127 IPR011990 GO:0005515
Apr9g1010 216 ProSiteProfiles TPR repeat region circular profile. 170 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1010 Apr-Chr9 19268842 19269947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1010 - - gmx:100809739 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1010 9 19268842 19269947 Apr9g1010 9 19268842 19269947 ECH
Apr9g1010 9 19268842 19269947 Apr5g1000 5 14628887 14630023 PCT