Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1006 ATGGCTTCGAATTCCGACTTGGCGCGCACCGTTGAGTCGGTGGTTGGCGTTTCCGTTTCGGATTCGTTGCTGGTGATTGTGACCACTTCTGTGGCGTTGGTGATTGGGATTCTGGTGTTCGTGTGGAAGAAGTCTTCGGATCGGAGCAAGGAGCCGAAGCCACTTACAGTGCCTAAGTTGCTGGTGAAGGAAGAAGAAGAAGAAGAAGACGTTGGTGACGGGAAGACTAAGGTTACTATCTTCTTTGGAACTCAAACTGGTACTGCTGAGGGCTTTGCTAAGGCTTTGGCAGAGGAGATCAAGGCAAGGTATGAAAAAGCAGCTATCAAAGATGACTATGCAATGGATGATGATCAATATGAGGAGAAGCTGAAGAAAGAGACACTTGCATTTTTTATGTTGGCAACGTATGGAGATGGAGAACCAACTGACAATGCTGCAAGGTTCTACAAATGGTTTACTGAGGTTTATGAGAGGGGTACTTGGCTTGGTCAGCTCACATATGGTGTTTTTGGCTTAGGTAACAGGCAATACGAACATTTTAATAAGATAGGTAAAATAGTTGATGAAGAACTTAGTGAACAAGGTGCAAAGCGTCTTGTTCCATTGGGGCTTGGGGATGATGATCAATCCATTGAAGATGATTTTGTTGCTTGGAAGGAATCTCTGTGGCCTGAGTTGGATCAGTTGCTTCGAGATGAGGATGATGTGCATACCGTCTCTACTCCTTATAAGGCTGCTATTCCTGAATATCGACTGGTTATTCATGACCCCACTTTCACATCATGCATTGATAATCACTTAAATGTGGCAAATGGGAATGCTGTGTTTGATATTCATCATCCTTGCAGAGTTAATGTTGCTGTTCAGAGAGAGCTTCACAAACCTGAGTCTGATCGCTCTTGCATACATTTGGAGTTTGACATATCAGGGACTGGCATAATATATGAAACTGGTGACCATGTGGGTGTTTTTGCTGAAAATTCTGAAGAAACTGTTGAAGAAGCTGGGAAGTTGTTGGGTCAGGATTTAGATTTTCTATTCTCTCTTCATGCTGATAATGAAGATGGTACTCCTCTAGGAGGTTCTCTGCCACCTCCTTTCCCTGGCCCTTGCACACTGCGATTTGCTTTAGCACATTATGCAGACCTCTTGAATCCCCCACGCAAGTCTGCTTTGGTCGCTCTGGCTGCTCATACATCTGAACCTAATGAAGCAGATAGATTAACATTCCTCTCATCTCCTCAGGGGAAGGATGAGTACTCCAAATGGGTGGTTGGAAGTCAGAGAAGTCTCCTTGAGGTAATGGCTGAGTTTCCATCAGCAAAACCACCCCTTGGTGTTTTTTTTGCTGCAGTAGCCCCTCACTTACAGCCTCGTTATTATTCTATTTCATCCTCACCTAGGTATGCCCCAAAAAGGGTACATGTAACTTGTGCCTTGGTGTATGGTCCAACTCCTACTGGAAGAATTCATAAAGGAGTATGTTCAACCTGGATGAAGAATGCCATTCCTTTAGACAAAAGTCGTGACTGTAGTTCAGCTCCTATTTTTATTAGAACATCAAATTTCAAGTTACCAGCTGATCATTCCATTCCTATTGTTATGGTTGGTCCTGGTACTGGCTTGGCACCCTTCAGGGGATTTTTACAGGAAAGATTGGCCCTCAAAGAGGATGGCGTTCAACTTGGTCCTGCATTACTCTTCTTTGGATGTAGGAATCGTCAAATGGATTTTATTTATGAGGGTGAGCTGAAGAATTTTGTGGAACAAGGTGCTCTGTCAGAGTTGATTGTCGCATTCTCTAGAGAGGGACCTGAAAAGGAGTATGTTCAACACAAGATGATGGATAAAGCAGCAAATGTGTGGAGTTTAATTTCTCAGGGAGGTTATCTTTATGTCTGTGGTGATGCTAAGGGTATGGCCAGAGATGTTCATCGGACTCTTCATACCATTGTCCAGCAGCAGGACAATGTGGACTCTTCAAAGGCAGAGGCTATAGTGAAAAAACTCCAGATGGATGGACGTTACCTTAGAGATGTCTGGTAA 2049 0.4383 MASNSDLARTVESVVGVSVSDSLLVIVTTSVALVIGILVFVWKKSSDRSKEPKPLTVPKLLVKEEEEEEDVGDGKTKVTIFFGTQTGTAEGFAKALAEEIKARYEKAAIKDDYAMDDDQYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEVYERGTWLGQLTYGVFGLGNRQYEHFNKIGKIVDEELSEQGAKRLVPLGLGDDDQSIEDDFVAWKESLWPELDQLLRDEDDVHTVSTPYKAAIPEYRLVIHDPTFTSCIDNHLNVANGNAVFDIHHPCRVNVAVQRELHKPESDRSCIHLEFDISGTGIIYETGDHVGVFAENSEETVEEAGKLLGQDLDFLFSLHADNEDGTPLGGSLPPPFPGPCTLRFALAHYADLLNPPRKSALVALAAHTSEPNEADRLTFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPHLQPRYYSISSSPRYAPKRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLDKSRDCSSAPIFIRTSNFKLPADHSIPIVMVGPGTGLAPFRGFLQERLALKEDGVQLGPALLFFGCRNRQMDFIYEGELKNFVEQGALSELIVAFSREGPEKEYVQHKMMDKAANVWSLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQDNVDSSKAEAIVKKLQMDGRYLRDVW* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1006 682 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 523 682 IPR039261 -
Apr9g1006 682 Gene3D - 326 458 IPR023173 GO:0016491
Apr9g1006 682 Gene3D Translation factors 282 525 - -
Apr9g1006 682 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 12 682 - -
Apr9g1006 682 Pfam Oxidoreductase NAD-binding domain 536 646 IPR001433 GO:0016491
Apr9g1006 682 Pfam Flavodoxin 80 219 IPR008254 GO:0010181
Apr9g1006 682 Gene3D - 526 682 IPR039261 -
Apr9g1006 682 ProSiteProfiles Flavodoxin-like domain profile. 78 224 IPR008254 GO:0010181
Apr9g1006 682 PANTHER NITRIC OXIDE SYNTHASE-RELATED 12 682 - -
Apr9g1006 682 Hamap NADPH--cytochrome P450 reductase [POR]. 18 682 IPR023208 GO:0003958
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 316 326 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 460 467 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 494 503 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 535 554 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 564 573 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 577 588 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 608 624 IPR001709 GO:0016491
Apr9g1006 682 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 631 639 IPR001709 GO:0016491
Apr9g1006 682 Gene3D - 43 242 IPR029039 -
Apr9g1006 682 Pfam FAD binding domain 277 499 IPR003097 GO:0016491
Apr9g1006 682 CDD CYPOR 278 682 - -
Apr9g1006 682 SUPERFAMILY Riboflavin synthase domain-like 273 524 IPR017938 -
Apr9g1006 682 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 280 527 IPR017927 GO:0016491
Apr9g1006 682 SUPERFAMILY Flavoproteins 72 232 IPR029039 -
Apr9g1006 682 PIRSF P450R 12 682 IPR023208 GO:0003958
Apr9g1006 682 PRINTS Flavodoxin signature 79 92 IPR001094 GO:0010181
Apr9g1006 682 PRINTS Flavodoxin signature 131 142 IPR001094 GO:0010181
Apr9g1006 682 PRINTS Flavodoxin signature 165 175 IPR001094 GO:0010181
Apr9g1006 682 PRINTS Flavodoxin signature 189 208 IPR001094 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1006 Apr-Chr9 19202351 19211280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1006 K00327 - gmx:547712 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1006 9 19202351 19211280 Apr9g1006 9 19202351 19211280 ECH
Apr9g1006 9 19202351 19211280 Apr5g1004 5 14654795 14662566 PCT