Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1004 ATGGCTTCGAATTCCGATTTGGTGCGCACCATTGAGTCGGTGCTCGGCGTTTCGCTCGGCGATTCCGTTTCCGATTCGTTGCTTCTCATCGCGACCACTTCCGCCGCCGTTATAATCGGCCTTTTGGTGTTCCTGTGGAAGAAATCTTCGGATCGGAACAAGGAGGTGAAGCCGGTGATCGTGCCGAAGTCGTTGGTGAAGGATGAAGATGATGACGTTGACGTTGCCTCGGGTAAGACTAAGGTCACCGTTTTCTTTGGTACTCAAACCGGCACTGCTGAGGGATTTGCTAAGGCATTGGCTGAGGAGATCAAGGCAAGGTATGAAAAAGCAGCTGTCAAAGTTGTTGACCTGGATGACTATGCAATGGATGATGATCAGTATGAGGAGAAGCTGAAGAAAGAGACTCTTGCATTTTTCATGCTGGCAACTTATGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTACAAATGGTTTACTGAGGTTTATGAGAGGGGCACCTGGCTTCAACAGCTCACGTATGGAGTTTTTGGCCTAGGTAACAGACAATATGAACATTTTAATAAGATAGGTAAAGTTGTTGATGAAGAACTTAGTGAACAAGGTGCAAAGCGCCTTGTTCCTGTTGGACTAGGTGACGATGATCAATCCATTGAGGATGATTTTTCTGCCTGGAAAGAAACTCTGTGGCCTGAGCTGGATCATCTGCTTCGAGATGAGGATGATACAAATACTGTCTCTACTCCCTATACAGCTGCTATTCCCAAATACCGAGTAGTGATTCATGATCCCACTGTCACATCATCGTATGATAATCACTTAAATGTGGCAAATGGGAATGCTGTGTTTGATATTCATCATCCTTGCAGGGTGAATGTTGCTGTTCAGAGGGAGCTTCACAAACCTGAGTCTGACCGTTCTTGCATACATTTGGAGTTTGATATATCAGGGACTGGCATAACATATGAAACTGGAGACCATGTGGGTGTTTATTCTGAGAATTGTGATGAAACTGTTGAAGAAGCTGGGAAATTGTTGGGTCAGAATTTAGATCTGTTGTTTTCTCTTCACACTGATAATGAGGATGGCACTTCCCTTGGTGGGTCTCTGCTGCCTCCTTTCCCTGGTCCTTGCACCCTGCGTGCTGCATTAGCACACCATGCTGATCTCTTGAATCCCCCACGCAAGGCTGCTTTAGTTGCCTTAGCTGCTCATGCTTCTGAACCTAGTGAAGCAGAAAGATTAAAGTTCCTCACATCGCCTCAGGGAAAGGATGAGTACTCCAAATGGGTGGTTGGAAGCCAGAGAAGTCTCCTTGAGGTGATGGCTGAGTTTCCATCAGCAAAACCTCCCCTCGGTGTGTTTTTTGCTGCTGTAGCCCCTCGTTTACAGCCTCGATATTATTCTATTTCATCCTCTCCAAGGTTTGCCCCACAAAGGGTACATGTAACTTGCGCCTTGGTCTATGGTCCAACTCCCACTGGTAGAATTCACAAAGGAGTGTGTTCAACATGGATGAAGAATGCTATATCCTTGGAGAAAAGCCGTGACTGTAGCTGGGCTCCTGTTTTTATTAGACCCTCAAATTTCAAGCTACCAGTTGATCTTTCAATTCCTATTATTATGGTTGGACCTGGTACTGGTTTGGCACCTTTCAGGGGATTTTTACAGGAAAGATTTGCCCTCAAAGAGGATGGTGTTCAACTTGGTCCTGCATTACTTTTCTTTGGATGTAGGAACCGTCGAATGGATTTTATTTATGAGGATGAGCTAAAGAATTTTGTGGAACAAGGTTCTCTGTCAGAGTTGATAGTTGCATTCTCTAGAGAGGGGCCTAAAAAGGAATATGTTCAACACAAGATGATGGATAAAGCTGCACAACTGTGGAGCCTGATTTCTCATGGAGGTTATCTTTACGTCTGTGGTGATGCCAAGGGTATGGCCAGAGATGTTCATCGAACTCTTCATACCATTGTCCAGCAGCAGGAAAATGTGGAGTCATCAAAAGCAGAGGCTATGGTGAAAAAACTGCAGATGGATGGACGATACCTTAGGGATGTCTGGTGA 2073 0.453 MASNSDLVRTIESVLGVSLGDSVSDSLLLIATTSAAVIIGLLVFLWKKSSDRNKEVKPVIVPKSLVKDEDDDVDVASGKTKVTVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDDQYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEVYERGTWLQQLTYGVFGLGNRQYEHFNKIGKVVDEELSEQGAKRLVPVGLGDDDQSIEDDFSAWKETLWPELDHLLRDEDDTNTVSTPYTAAIPKYRVVIHDPTVTSSYDNHLNVANGNAVFDIHHPCRVNVAVQRELHKPESDRSCIHLEFDISGTGITYETGDHVGVYSENCDETVEEAGKLLGQNLDLLFSLHTDNEDGTSLGGSLLPPFPGPCTLRAALAHHADLLNPPRKAALVALAAHASEPSEAERLKFLTSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAISLEKSRDCSWAPVFIRPSNFKLPVDLSIPIIMVGPGTGLAPFRGFLQERFALKEDGVQLGPALLFFGCRNRRMDFIYEDELKNFVEQGSLSELIVAFSREGPKKEYVQHKMMDKAAQLWSLISHGGYLYVCGDAKGMARDVHRTLHTIVQQQENVESSKAEAMVKKLQMDGRYLRDVW* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1004 690 Pfam Oxidoreductase NAD-binding domain 544 654 IPR001433 GO:0016491
Apr5g1004 690 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 288 535 IPR017927 GO:0016491
Apr5g1004 690 PRINTS Flavodoxin signature 83 96 IPR001094 GO:0010181
Apr5g1004 690 PRINTS Flavodoxin signature 139 150 IPR001094 GO:0010181
Apr5g1004 690 PRINTS Flavodoxin signature 173 183 IPR001094 GO:0010181
Apr5g1004 690 PRINTS Flavodoxin signature 197 216 IPR001094 GO:0010181
Apr5g1004 690 Gene3D - 334 466 IPR023173 GO:0016491
Apr5g1004 690 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 7 690 - -
Apr5g1004 690 PANTHER NITRIC OXIDE SYNTHASE-RELATED 7 690 - -
Apr5g1004 690 Hamap NADPH--cytochrome P450 reductase [POR]. 22 690 IPR023208 GO:0003958
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 324 334 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 468 475 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 502 511 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 543 562 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 572 581 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 585 596 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 616 632 IPR001709 GO:0016491
Apr5g1004 690 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 639 647 IPR001709 GO:0016491
Apr5g1004 690 PIRSF P450R 18 690 IPR023208 GO:0003958
Apr5g1004 690 Gene3D Translation factors 290 533 - -
Apr5g1004 690 SUPERFAMILY Riboflavin synthase domain-like 272 532 IPR017938 -
Apr5g1004 690 ProSiteProfiles Flavodoxin-like domain profile. 82 232 IPR008254 GO:0010181
Apr5g1004 690 SUPERFAMILY Flavoproteins 79 240 IPR029039 -
Apr5g1004 690 Gene3D - 534 690 IPR039261 -
Apr5g1004 690 Pfam FAD binding domain 285 507 IPR003097 GO:0016491
Apr5g1004 690 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 531 690 IPR039261 -
Apr5g1004 690 CDD CYPOR 286 690 - -
Apr5g1004 690 Gene3D - 47 251 IPR029039 -
Apr5g1004 690 Pfam Flavodoxin 84 227 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1004 Apr-Chr5 14654795 14662566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1004 K00327 - gmx:100798676 1246.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1004 5 14654795 14662566 Apr5g1004 5 14654795 14662566 ECH
Apr9g1006 9 19202351 19211280 Apr5g1004 5 14654795 14662566 PCT