Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0970 ATGTCCCCACGCAAGAGGCTGAGAAACCTCGTACACAACCTAAAGGACAAAGCCTCAGTCATCGTCGCATCTTTATCAATCAAGCGCCACGTGTCCTCCATTCGCGTCCATGTCCTTCGCGCCACCACTCACAACTTCTCCACTCCCCCATCGGAAGCCCGAATCGCCGCCATCCTATCCGCCGGCCGCGGCTCTTATATCCTGCCGCGCGCCTGCATAAACGCCCTCATGGACCGCCTTCACAAAACCCAGAACGCCACGGTGGCACTGAAATGCCTCTTCACCTTACACAACATAATAGCCAAAGGACCCTTAACGTTAAAGGACAACCTCTCCTATTACCCTTCCCACGGTGGCCACAACGCCCTTAACCTCTCTTCCTTCCGTGACAACGCGGACCTTGAGGCCTTAGAGCTTAGCACGTGGGTTCGTTGGTACGCGAAGGTTCTAGAACATGTGCTAACGGTTTCGAGGGTTTTGGGTTATTATCTTAGCTCGAGTGACGGAACAGAAAGAGAGCATTTGGGGGTGTCCAGTGGTGAGTTGTTGGGTGAAATACATGGTCTTGTGGATTTTGCGGAGCGTGTGAGTCACGTGCCTGACACGTTGCACTTGCAGAGGAATGACTTGGTGTATGAGGTGGTGAGATTGGTGGGGGAAGATTACGGGCGAGTTCAGCGTGAGATTTTGCTGCGCGTGGAGGAGATTGGGAAGAGGATGGGACGTTTTGACGTGGGGGAGTTGAGGGAGTTGGTGAGTTGTTTGAAAAGGTTGGAGGAGAGCAAGGGAAGGTTAGTGCTTTTGTTTGTCAACAGAAAGAGAAACGATGCGTTCTGGGAAGTGATTGGTGGGGTTAAGAGCAAGGGAGTGGTGATGATGGACGAGATAGAGGGGAAGTGGATGACGGTGGTGACGGCGAAGAACGAGTCGACTCGGTTCACGAACCCGTTTCTTGACCCGGGGCAATTGGTTCCGGTCCTACCTGGTGGAGCTTGGCCAGGTGTCACCCGAAACGAGTTTCTTTTAACTGTTCCAACGGTGGGATGA 1047 0.532 MSPRKRLRNLVHNLKDKASVIVASLSIKRHVSSIRVHVLRATTHNFSTPPSEARIAAILSAGRGSYILPRACINALMDRLHKTQNATVALKCLFTLHNIIAKGPLTLKDNLSYYPSHGGHNALNLSSFRDNADLEALELSTWVRWYAKVLEHVLTVSRVLGYYLSSSDGTEREHLGVSSGELLGEIHGLVDFAERVSHVPDTLHLQRNDLVYEVVRLVGEDYGRVQREILLRVEEIGKRMGRFDVGELRELVSCLKRLEESKGRLVLLFVNRKRNDAFWEVIGGVKSKGVVMMDEIEGKWMTVVTAKNESTRFTNPFLDPGQLVPVLPGGAWPGVTRNEFLLTVPTVG* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0970 348 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Apr9g0970 348 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 331 - -
Apr9g0970 348 CDD ANTH_N_AP180_plant 34 157 - -
Apr9g0970 348 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 331 IPR045192 GO:0048268|GO:0072583
Apr9g0970 348 SUPERFAMILY ENTH/VHS domain 33 161 IPR008942 -
Apr9g0970 348 Pfam ANTH domain 35 160 IPR011417 GO:0005543
Apr9g0970 348 Gene3D - 6 163 IPR008942 -
Apr9g0970 348 SMART enth_2 32 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0970 Apr-Chr9 18674086 18675132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0970 - - gmx:100817573 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0970 9 18674086 18675132 Apr9g0970 9 18674086 18675132 ECH
Apr9g0970 9 18674086 18675132 Apr5g0983 5 14407020 14409193 PCT