Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0983 ATGGCCCAACAAAAGAGGCTAAGAAACATCGCTCACAACCTCAAAGACAAAGCCTCGGTCATCGCAGCAGCGCTATCAATCAAGCGCCACGTGTCATCCGTCCGCGTCCACGTCATCCGCGCCACCACGCACGCCCTCGCCGCCCCTCCCTCCGACGATAAAATCGCTGCCGTCCTCGCCGTCGGGCACGGCTCCCACCTTCTCCCGCGCGCCTGCATCAACGCCCTCATGGACCGCCTGCACCATACCGGAAGTGCCACGGTGGCACTCAAATGCCTCTTCACACTCCACAACGTGGTCGTGAAGGGACCCTTCACTCTCAAGGACCAACTCTCCTGTTACCCTTCCTACGGTGGCCACAATTTTCTTAACCTTTCAACTTTCCGCGACGACTCGGACGTGGAATCCTTAGAACTAAGTTCCTGGGTTCGTTGGTACGCGAGAGTTTTAGAACTGAGCTTATCGGTTTCCAGAATCTTGGGTTATTATTTGAACTCTTCTTCAACCTCAACAACCCAAGACAGAAAGTGTTTGGTTTTGCGGAATTCAAACGCTGATTTGTTGTACAAACTGGAGTGTCTCGTTGTTTTCGTTGAGCAAATAAGTCACGTGCCTGAGTCTTTGCACCTTCAGAGGAACGAGTTGGTGTACGAAATAGTGAGGTTGGTGGGTGAAGATTATGGGAGCGTGCAGGGTGAGATTTTGGTGAGATTGGAAGAACTTGGGAACAGGATGGAGGAAATGGAAGTGAGTGAGTTGAACGAGTTGGCTGGTTATTTGAGAAGATTGGAAAAGAGTCAAGAAAAGTTGGTGCTTTTATTTGTGAACAGGAGAAAGAATAATGGGTTTTGGGATTTGATTGAAAAGACTAAAACGAAGGGGGTGAAGAAGAAGGAAGAGATAGAAGGGAAGTGGCTCACGGTGGTGACTACTAGCGCCGCCGAGTTGACTCGGTCGACAAACCCGTTTCTTGAGCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTTGCAACGGTAAGATGA 1026 0.5058 MAQQKRLRNIAHNLKDKASVIAAALSIKRHVSSVRVHVIRATTHALAAPPSDDKIAAVLAVGHGSHLLPRACINALMDRLHHTGSATVALKCLFTLHNVVVKGPFTLKDQLSCYPSYGGHNFLNLSTFRDDSDVESLELSSWVRWYARVLELSLSVSRILGYYLNSSSTSTTQDRKCLVLRNSNADLLYKLECLVVFVEQISHVPESLHLQRNELVYEIVRLVGEDYGSVQGEILVRLEELGNRMEEMEVSELNELAGYLRRLEKSQEKLVLLFVNRRKNNGFWDLIEKTKTKGVKKKEEIEGKWLTVVTTSAAELTRSTNPFLEPGQLSPVPRLSFATVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0983 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 333 IPR045192 GO:0048268|GO:0072583
Apr5g0983 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Apr5g0983 341 Pfam ANTH domain 35 274 IPR011417 GO:0005543
Apr5g0983 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 333 - -
Apr5g0983 341 CDD ANTH_N_AP180_plant 35 157 - -
Apr5g0983 341 Gene3D - 5 163 IPR008942 -
Apr5g0983 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0983 Apr-Chr5 14407020 14409193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0983 - - gmx:100788852 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0983 5 14407020 14409193 Apr5g0983 5 14407020 14409193 ECH
Apr9g0970 9 18674086 18675132 Apr5g0983 5 14407020 14409193 PCT