Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0959 ATGTTACTCAAGTACCTAAAGCACACAGTTGGTCAAGGAGTCTTATTCAAATCAAATTCTAACACTAAGCTCTATGCTTATGTTAATGCTGATTGGGGCGCATTATCTCATCAAAAGGCATCCACTAATGCACTAGTTTTGGGTCTATGTTTAGCAATCAACATGGCTCTGCCAACACTCGCAGCTATCCACACAGTCGGAGACACTTCAGGTTGGACAATTGGCACTGATTACAGCACATGGGCTGGTAGCTTGACCTTTGTAGTTGGTGATAGTCTTGTTTTCAACTATGGAACTGGTCACAGTGTGGATAAAGTTAAGAAAAGCGATTACAAGACATGCAGTGTGGGCAATTCATTGAGTACAGAAAGTAGTGGCGCAACAACTATTGGCCCTAAAAGTGTTGGCACTCATTACTTCATATGTTCGATTCCTGGGCATTGCAAAGGTGGCATGAAGCTTGCTGTTGCTGTAAAGGCTAGAAAAGCCACTGCTCCTGCTGTGTCACCATCATCTAGTAAAGACTCACATTCTGATGAAACCACAGACACACCCACTAATAACACAAAAACCAAAACCGAACCATCCAACTCATATTCATCAAATAAGTCATCAGCAACTGGTCTCTCACCAATTGTGGCTATGTTGGCTGTTTCTTTGATCTCCTACTATGTGTTGTGTCTTGCATCAATTTTCCCAGAGTCAGGAGTCGGGACAGAGACAAAAAAGGGCAATGGCAATGAACCAGGGACGACCATGGCTACCCACGCTCAAAGCGTAACTGAGGTTGCTCCTCAACCACTTGGAGGGAGTGGCGGCAGATCTACAACCTACTCGTTAAATGAAGAAGAAGAATGA 858 0.4382 MLLKYLKHTVGQGVLFKSNSNTKLYAYVNADWGALSHQKASTNALVLGLCLAINMALPTLAAIHTVGDTSGWTIGTDYSTWAGSLTFVVGDSLVFNYGTGHSVDKVKKSDYKTCSVGNSLSTESSGATTIGPKSVGTHYFICSIPGHCKGGMKLAVAVKARKATAPAVSPSSSKDSHSDETTDTPTNNTKTKTEPSNSYSSNKSSATGLSPIVAMLAVSLISYYVLCLASIFPESGVGTETKKGNGNEPGTTMATHAQSVTEVAPQPLGGSGGRSTTYSLNEEEE* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0959 285 MobiDBLite consensus disorder prediction 240 285 - -
Apr9g0959 285 MobiDBLite consensus disorder prediction 182 205 - -
Apr9g0959 285 SUPERFAMILY Cupredoxins 61 158 IPR008972 -
Apr9g0959 285 ProSitePatterns Type-1 copper (blue) proteins signature. 136 152 IPR028871 -
Apr9g0959 285 PANTHER BLUE COPPER PROTEIN 49 217 IPR039391 GO:0009055
Apr9g0959 285 MobiDBLite consensus disorder prediction 165 205 - -
Apr9g0959 285 CDD Phytocyanin 62 158 - -
Apr9g0959 285 ProSiteProfiles Phytocyanin domain profile. 62 160 IPR003245 GO:0009055
Apr9g0959 285 PANTHER BLUE COPPER PROTEIN-LIKE 49 217 - -
Apr9g0959 285 Gene3D - 60 165 IPR008972 -
Apr9g0959 285 Pfam Plastocyanin-like domain 72 152 IPR003245 GO:0009055
Apr9g0959 285 MobiDBLite consensus disorder prediction 240 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0959 Apr-Chr9 18374173 18381937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0959 69 229 Miscellaneous Gene Families AT1G22480 38.509 8.98e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0959 - - aprc:113874371 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0959 9 18374173 18381937 Apr9g0959 9 18374173 18381937 ECH
Apr9g0959 9 18374173 18381937 Apr5g0978 5 14360817 14362070 PCT